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13_1_40cm_4_scaffold_1666

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1666_1
Candidatus Nitrosopelagicus brevis, Candidatus Nitrosopelagicus, Thaumarchaeota, Archaea

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3..500
DNA (498bp) protein (166aa)
NUDIX hydrolase n=1 Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KKJ2_9ARCH
NUDIX domain protein
NUDIX domain protein {ECO:0000313|EMBL:AJA92025.1}; TaxID=1410606 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Candidatus Nitrosopelagicus brevis.;"
13_1_40cm_4_scaffold_1666_2

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548..706
DNA (159bp) protein (53aa)
50S ribosomal protein L39e n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A1I1_NITMS
50S ribosomal protein L39e
50S ribosomal protein L39e {ECO:0000256|HAMAP-Rule:MF_00629}; TaxID=1502293 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;" source="Marine Group I thaumarchaeote SCGC
13_1_40cm_4_scaffold_1666_3

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707..1096
DNA (390bp) protein (130aa)
Ribosomal protein L31e n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ATZ5_9ARCH
Ribosomal protein L31e (RP-L31e, RPL31) {ECO:0000313|EMBL:AIF25307.1}; TaxID=1456417 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote SAT1000_50_F07.
Ribosomal protein L31e (modular protein)
13_1_40cm_4_scaffold_1666_4
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(1099..2040)
DNA (942bp) protein (314aa)
tubulin/FtsZ GTPase id=14427948 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
tubulin/FtsZ GTPase Tax=CSP1_1_Thaumarchaeota
tubulin/FtsZ family, GTPase domain protein
13_1_40cm_4_scaffold_1666_5
Nitrosopumilus maritimus, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(2128..3396)
DNA (1269bp) protein (423aa)
MiaB-like tRNA modifying enzyme n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A1H8_NITMS
MiaB-like tRNA modifying enzyme
MiaB-like tRNA modifying enzyme {ECO:0000313|EMBL:ABX13157.1}; TaxID=436308 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Nitrosopumilus maritimus (s
13_1_40cm_4_scaffold_1666_6
uncultured marine crenarchaeote HF4000_ANIW97M7, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(3399..4793)
DNA (1395bp) protein (465aa)
Putative Lyase n=1 Tax=uncultured marine crenarchaeote HF4000_ANIW97M7 RepID=B3T3C4_9ARCH
Putative Lyase {ECO:0000313|EMBL:ABZ07083.1}; TaxID=455568 species="Archaea; Thaumarchaeota; Nitrosopumilales; environmental samples.;" source="uncultured marine crenarchaeote HF4000_ANIW97M7.;"
fumarate lyase
13_1_40cm_4_scaffold_1666_7
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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4916..6235
DNA (1320bp) protein (440aa)
nirK; putative copper-containing nitrite reductase (EC:1.7.2.1)
NirK, nitrite reductase multicopper oxidase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ATE4_9ARCH
NirK, nitrite reductase multicopper oxidase {ECO:0000313|EMBL:CDI05991.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
13_1_40cm_4_scaffold_1666_8

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6305..7258
DNA (954bp) protein (318aa)
D-isomer specific 2-hydroxyacid dehydrogenase (SerA, PHGDH) {ECO:0000313|EMBL:AIF12595.1}; EC=1.1.1.95 {ECO:0000313|EMBL:AIF12595.1};; TaxID=1456203 species="Archaea; Thaumarchaeota; environmental sam
pdxB; 4-phosphoerythronate dehydrogenase (EC:1.1.1.290)
NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase id=14427941 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
13_1_40cm_4_scaffold_1666_9
Candidatus Nitrosopumilus salaria, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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7267..7998
DNA (732bp) protein (244aa)
Uncharacterized protein {ECO:0000313|EMBL:EIJ66948.1}; TaxID=859350 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus salaria B
hypothetical protein
13_1_40cm_4_scaffold_1666_10
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(8000..8626)
DNA (627bp) protein (209aa)
hypothetical protein id=14427943 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein Tax=CSP1_1_Thaumarchaeota
hypothetical protein
13_1_40cm_4_scaffold_1666_11
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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8741..9199
DNA (459bp) protein (153aa)
50S ribosomal protein L15e id=14427937 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
50S ribosomal protein L15e Tax=CSP1_1_Thaumarchaeota
50S ribosomal protein L15e
13_1_40cm_4_scaffold_1666_12
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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9196..9699
DNA (504bp) protein (168aa)
hypothetical protein id=14427936 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein Tax=CSP1_1_Thaumarchaeota
hypothetical protein
13_1_40cm_4_scaffold_1666_13
Nitrosopumilus maritimus, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(9696..10385)
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A5T7_NITMS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX13092.1}; TaxID=436308 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Nitrosopumilus maritimus (strain SC
13_1_40cm_4_scaffold_1666_14

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comp(10679..10909)
DNA (231bp) protein (77aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL28605.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
AsnC family transcriptional regulator id=14427901 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
AsnC family transcriptional regulator
13_1_40cm_4_scaffold_1666_15
Candidatus Nitrosopumilus salaria, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(11186..11602)
DNA (417bp) protein (139aa)
Sugar-specific transcriptional regulator TrmB n=1 Tax=Candidatus Nitrosopumilus salaria BD31 RepID=I3D3N8_9ARCH
Sugar-specific transcriptional regulator TrmB {ECO:0000313|EMBL:EIJ66331.1}; TaxID=859350 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Ni
transcriptional regulator TrmB
13_1_40cm_4_scaffold_1666_16
unknown

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11753..12046
DNA (294bp) protein (98aa)

This feature has no annotations

13_1_40cm_4_scaffold_1666_17
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(12137..13336)
DNA (1200bp) protein (400aa)
tRNA pseudouridine synthase TruD; K06176 tRNA pseudouridine13 synthase [EC:5.4.99.27] id=14427904 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
tRNA pseudouridine synthase TruD; K06176 tRNA pseudouridine13 synthase [EC:5.4.99.27] Tax=CSP1_1_Thaumarchaeota
tRNA pseudouridine synthase TruD
13_1_40cm_4_scaffold_1666_18
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(13340..14899)
DNA (1560bp) protein (520aa)
hypothetical protein id=14427905 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein Tax=CSP1_1_Thaumarchaeota
hypothetical protein
13_1_40cm_4_scaffold_1666_19
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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14996..16090
DNA (1095bp) protein (365aa)
Putative transmembrane protein n=1 Tax=uncultured crenarchaeote RepID=Q8NKM7_9CREN
putative esterase of the alpha-beta hydrolase superfamily
Putative esterase of the alpha-beta hydrolase superfamily {ECO:0000313|EMBL:AIF85472.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitroso
13_1_40cm_4_scaffold_1666_20
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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16234..16530
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AUS4_9ARCH
putative RNA-binding protein, contains TRAM domain
Putative RNA-binding protein, contains TRAM domain {ECO:0000313|EMBL:AIF83749.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera
13_1_40cm_4_scaffold_1666_21
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(16847..17395)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ARN1_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI05396.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
13_1_40cm_4_scaffold_1666_22
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(17401..18750)
DNA (1350bp) protein (450aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AS82_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI05395.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
13_1_40cm_4_scaffold_1666_23
unknown

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comp(18963..19283)
DNA (321bp) protein (107aa)

This feature has no annotations

13_1_40cm_4_scaffold_1666_24
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(19285..20097)
DNA (813bp) protein (271aa)
hypothetical protein id=14427757 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin2_Thaum organism_group=Archaeon
hypothetical protein Tax=CSP1_1_Thaumarchaeota
hypothetical protein
13_1_40cm_4_scaffold_1666_25
RBG_19FT_COMBO_Chloroflexi_50_10_curated, Chloroflexi, Bacteria

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comp(20139..21419)
DNA (1281bp) protein (427aa)
Sodium/proton antiporter, CPA1 family n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BNM4_9EURY
Na+/H+ antiporter; K03316 monovalent cation:H+ antiporter, CPA1 family Tax=RBG_19FT_COMBO_Chloroflexi_50_10_curated
Na/H antiporter
13_1_40cm_4_scaffold_1666_26
Nitrosopumilus maritimus, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(21574..22074)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A3A7_NITMS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX12536.1}; TaxID=436308 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Nitrosopumilus maritimus (strain SC
13_1_40cm_4_scaffold_1666_27
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(22120..24606)
DNA (2487bp) protein (829aa)
peptidase M1 membrane alanine aminopeptidase id=14428343 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
peptidase M1 membrane alanine aminopeptidase Tax=CSP1_1_Thaumarchaeota
peptidase family M1
13_1_40cm_4_scaffold_1666_28
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(24873..25364)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B3M9_9ARCH
DedA family protein
DedA family protein {ECO:0000313|EMBL:AIC16209.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera vienn
13_1_40cm_4_scaffold_1666_29

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comp(25380..25613)
DNA (234bp) protein (78aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL11798.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein id=14427880 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein
13_1_40cm_4_scaffold_1666_30
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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25752..26153
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AV04_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI06308.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
hypothetical protein
Displaying items 1-30 of 38 in total

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