ggKbase home page

13_1_40cm_4_scaffold_670

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_670_1
Candidatus Nitrosopumilus koreensis, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(1..225)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B6E3_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFS81044.1}; TaxID=1229908 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus koreensi
13_1_40cm_4_scaffold_670_2
unknown

Not on your lists

comp(436..1053)
DNA (618bp) protein (206aa)

This feature has no annotations

13_1_40cm_4_scaffold_670_3
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

Not on your lists

1415..3202
DNA (1788bp) protein (596aa)
Rossmann-fold oxidoreductase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AT34_9ARCH
Rossmann-fold oxidoreductase {ECO:0000313|EMBL:CDI05807.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
Oxidoreductase, short chain dehydrogenase/reductase family protein
13_1_40cm_4_scaffold_670_4
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(3314..4084)
DNA (771bp) protein (257aa)
hypothetical protein Tax=CSP1_1_Thaumarchaeota
hypothetical protein id=14427787 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein
13_1_40cm_4_scaffold_670_5
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(4146..4805)
DNA (660bp) protein (220aa)
hypothetical protein id=14427788 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein Tax=CSP1_1_Thaumarchaeota
Extracellular protein
13_1_40cm_4_scaffold_670_6
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

4886..5899
DNA (1014bp) protein (338aa)
hom; Homoserine dehydrogenase (EC:1.1.1.3)
homoserine dehydrogenase Tax=CSP1_1_Thaumarchaeota
homoserine dehydrogenase id=14427729 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
13_1_40cm_4_scaffold_670_7

Not on your lists


5896..6369
DNA (474bp) protein (158aa)
PUA domain-containing protein {ECO:0000313|EMBL:AIF15451.1}; TaxID=1456252 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_70_D07.;"
PUA domain-containing protein id=14427728 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
PUA domain-containing protein
13_1_40cm_4_scaffold_670_8
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

Not on your lists

comp(6370..6948)
DNA (579bp) protein (193aa)
Proteasome subunit beta {ECO:0000256|HAMAP-Rule:MF_02113}; EC=3.4.25.1 {ECO:0000256|HAMAP-Rule:MF_02113};; 20S proteasome beta subunit {ECO:0000256|HAMAP-Rule:MF_02113}; Proteasome core protein PsmB {
Proteasome subunit beta 1 n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ARZ9_9ARCH
putative proteasome endopeptidase complex, beta subunit
13_1_40cm_4_scaffold_670_9
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(7063..8391)
DNA (1329bp) protein (443aa)
Putative peptidase M20 n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IDX3_NITGG
peptidase M20
Putative peptidase M20 {ECO:0000313|EMBL:AFU59581.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera g
13_1_40cm_4_scaffold_670_10
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(8425..9288)
DNA (864bp) protein (288aa)
nnrD; ADP-dependent (S)-NAD(P)H-hydrate dehydratase (EC:4.2.1.136)
carbohydrate kinase id=14427724 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
carbohydrate kinase Tax=CSP1_1_Thaumarchaeota
13_1_40cm_4_scaffold_670_11
uncultured marine crenarchaeote HF4000_APKG3K8, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(9294..10253)
DNA (960bp) protein (320aa)
Putative methyltransferase n=1 Tax=uncultured marine crenarchaeote HF4000_APKG3K8 RepID=B3T7W2_9ARCH
Putative methyltransferase {ECO:0000313|EMBL:ABZ08671.1}; TaxID=455588 species="Archaea; Thaumarchaeota; Nitrosopumilales; environmental samples.;" source="uncultured marine crenarchaeote HF4000_APKG3
tRNA methyltransferase complex GCD14 subunit
13_1_40cm_4_scaffold_670_12
unknown

Not on your lists

comp(10264..10440)
DNA (177bp) protein (59aa)

This feature has no annotations

13_1_40cm_4_scaffold_670_13
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists


comp(10460..12337)
DNA (1878bp) protein (626aa)
arginyl-tRNA synthetase (EC:6.1.1.19)
arginyl-tRNA synthetase id=14427718 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
arginyl-tRNA synthetase Tax=CSP1_1_Thaumarchaeota
13_1_40cm_4_scaffold_670_14
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(12342..13037)
DNA (696bp) protein (232aa)
SPP-like hydrolase id=14427717 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
SPP-like hydrolase Tax=CSP1_1_Thaumarchaeota
SPP-like hydrolase
13_1_40cm_4_scaffold_670_15
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

13123..13323
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CVZ5_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:EGP93447.1}; TaxID=1001994 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarch
hypothetical protein
13_1_40cm_4_scaffold_670_16
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

Not on your lists

13327..14427
DNA (1101bp) protein (367aa)
Putative GTPase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ARY7_9ARCH
Putative GTPase {ECO:0000313|EMBL:CDI05427.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
small GTP-binding protein
13_1_40cm_4_scaffold_670_17
unknown

Not on your lists

comp(14717..14926)
DNA (210bp) protein (70aa)

This feature has no annotations

13_1_40cm_4_scaffold_670_18
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(14970..15254)
DNA (285bp) protein (95aa)
hypothetical protein id=14427713 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein Tax=CSP1_1_Thaumarchaeota
hypothetical protein
13_1_40cm_4_scaffold_670_19

Not on your lists

comp(15295..15486)
DNA (192bp) protein (64aa)
hypothetical protein n=2 Tax=Nitrosopumilus RepID=UPI000373271B
Triple helix repeat-containing collagen protein {ECO:0000313|EMBL:KFM22272.1}; TaxID=1502289 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;" source="Marine Group I tha
triple helix repeat-containing collagen
Displaying 19 items

View Taxonomy