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13_1_40cm_4_scaffold_1250

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1250_1
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

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comp(1..876)
DNA (876bp) protein (292aa)
carbohydrate ABC transporter membrane protein 1, cut1 family; K02025 multiple sugar transport system permease protein id=7200740 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
carbohydrate ABC transporter membrane protein 1, cut1 family; K02025 multiple sugar transport system permease protein Tax=RIFOXYC12_FULL_TA06_54_24_curated
binding-protein-dependent transport systems inner membrane component
13_1_40cm_4_scaffold_1250_2
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

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comp(882..2198)
DNA (1317bp) protein (439aa)
extracellular solute-binding protein family 1; K02027 multiple sugar transport system substrate-binding protein id=24411898 bin=RBG_19FT_COMBO_GAL15_69_19 species=Kosmotoga olearia genus=Kosmotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
extracellular solute-binding protein family 1; K02027 multiple sugar transport system substrate-binding protein Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
putative ABC transporter substrate-binding protein
13_1_40cm_4_scaffold_1250_3
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

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2242..3039
DNA (798bp) protein (266aa)
glycerophosphoryl diester phosphodiesterase; K01126 glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] Tax=CG_Anaero_02
Glycerophosphodiester phosphodiesterase n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67LK3_SYMTH
glycerophosphodiester phosphodiesterase
13_1_40cm_4_scaffold_1250_4
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

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3078..4175
DNA (1098bp) protein (366aa)
galactonate dehydratase (EC:4.2.1.6) id=24426859 bin=RBG_19FT_COMBO_GAL15_69_19 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
galactonate dehydratase (EC:4.2.1.6) Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
galactonate dehydratase (EC:4.2.1.6)
13_1_40cm_4_scaffold_1250_5
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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4376..5560
DNA (1185bp) protein (395aa)
GAF sensor signal transduction histidine kinase n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B7C8_HERA2
GAF sensor signal transduction histidine kinase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
GAF sensor signal transduction histidine kinase
13_1_40cm_4_scaffold_1250_6
Scytonema tolypothrichoides, Scytonema, Nostocales, Cyanobacteria, Bacteria

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5557..6630
DNA (1074bp) protein (358aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1233231 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scyton
Two-component hybrid sensor and regulator n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67LR3_SYMTH
two-component hybrid sensor and regulator
13_1_40cm_4_scaffold_1250_7
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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6627..7355
DNA (729bp) protein (243aa)
Phosphate regulon transcriptional regulatory protein PhoB (SphR) n=1 Tax=alpha proteobacterium JLT2015 RepID=M2TR07_9PROT
putative two-component system response regulator Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
winged helix family two component transcriptional regulator
13_1_40cm_4_scaffold_1250_8
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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comp(7365..8615)
DNA (1251bp) protein (417aa)
Diguanylate cyclase with GAF sensor n=1 Tax=uncultured bacterium RepID=K2F1A8_9BACT
GAF sensor-containing diguanylate cyclase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
GAF sensor-containing diguanylate cyclase
13_1_40cm_4_scaffold_1250_9
unknown

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8780..9556
DNA (777bp) protein (259aa)

This feature has no annotations

13_1_40cm_4_scaffold_1250_10
unknown

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9599..9751
DNA (153bp) protein (51aa)

This feature has no annotations

13_1_40cm_4_scaffold_1250_11
unknown

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9776..10780
DNA (1005bp) protein (335aa)

This feature has no annotations

13_1_40cm_4_scaffold_1250_12
unknown

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10798..11202
DNA (405bp) protein (135aa)

This feature has no annotations

13_1_40cm_4_scaffold_1250_13
unknown

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11202..11576
DNA (375bp) protein (125aa)

This feature has no annotations

13_1_40cm_4_scaffold_1250_14
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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comp(11494..15252)
DNA (3759bp) protein (1253aa)
dnaE; DNA polymerase III subunit alpha; K14162 error-prone DNA polymerase [EC:2.7.7.7] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
sti:Sthe_0227 DNA polymerase III, alpha subunit (EC:2.7.7.7); K14162 error-prone DNA polymerase [EC:2.7.7.7] id=1241817 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
DNA polymerase III subunit alpha (EC:2.7.7.7)
13_1_40cm_4_scaffold_1250_15
unknown

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comp(15641..15766)
DNA (126bp) protein (42aa)

This feature has no annotations

Displaying 15 items

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