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13_1_40cm_4_scaffold_1714

Search features with annotation key words

Displaying items 1-30 of 42 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1714_1
unknown

Not on your lists

comp(2..97)
DNA (96bp) protein (32aa)

This feature has no annotations

13_1_40cm_4_scaffold_1714_2
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

787..1854
DNA (1068bp) protein (356aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI000374DA1C
FAD-dependent oxidoreductase {ECO:0000313|EMBL:EWS99908.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B
flavin-dependent oxidoreductase, MSMEG_0569 family
13_1_40cm_4_scaffold_1714_3
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(1873..3696)
DNA (1824bp) protein (608aa)
serine/threonine protein kinase with PASTA sensor(s); K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Serine/threonine-protein kinase pknB n=1 Tax=Mycobacterium hassiacum DSM 44199 RepID=K5BI95_9MYCO
Serine/threonine protein kinase
13_1_40cm_4_scaffold_1714_4
Brevibacillus agri, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3985..4821)
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Brevibacillus agri BAB-2500 RepID=L5MV01_9BACL
Uncharacterized protein {ECO:0000313|EMBL:ELK42191.1}; TaxID=1246477 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus agri BAB-2500.;"
hypothetical protein
13_1_40cm_4_scaffold_1714_5
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

5153..6337
DNA (1185bp) protein (395aa)
glgA; glycogen synthase (EC:2.4.1.21); K00703 starch synthase [EC:2.4.1.21] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
glgA; glycogen synthase (EC:2.4.1.21)
Glycogen synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ACL8_GEMAT
13_1_40cm_4_scaffold_1714_6
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

6365..7459
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C4V3_SPHTD
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein
13_1_40cm_4_scaffold_1714_7
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(7819..8607)
DNA (789bp) protein (263aa)
Peptidase M23 n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GEF7_9FIRM
peptidase M23 Tax=RBG_16_Chloroflexi_68_14_curated
peptidase M23
13_1_40cm_4_scaffold_1714_8
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8642..9445
DNA (804bp) protein (268aa)
Putative uncharacterized protein n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6B179_DELSC
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEF92432.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (str
13_1_40cm_4_scaffold_1714_9
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

9442..10209
DNA (768bp) protein (256aa)
inositol monophosphatase; K01092 myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003459861
inositol monophosphatase
13_1_40cm_4_scaffold_1714_10
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10378..10776
DNA (399bp) protein (133aa)
Response regulator n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MRB9_CORCM
Response regulator {ECO:0000313|EMBL:KFE62166.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangiu
spo0F4; response regulator
13_1_40cm_4_scaffold_1714_11
Kitasatospora setae, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10800..11405
DNA (606bp) protein (202aa)
Putative dioxygenase n=1 Tax=Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054) RepID=E4N129_KITSK
putative dioxygenase
Putative dioxygenase {ECO:0000313|EMBL:BAJ31863.1}; TaxID=452652 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora setae (strain ATCC 33774
13_1_40cm_4_scaffold_1714_12
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

11490..12035
DNA (546bp) protein (182aa)
pyrR; Pyrimidine operon regulatory protein; K02825 pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
bifunctional pyrimidine regulatory protein PyrR/uracil phosphoribosyltransferase (EC:2.4.2.9)
Bifunctional protein PyrR n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CKS6_DESK7
13_1_40cm_4_scaffold_1714_13
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

12055..13005
DNA (951bp) protein (317aa)
pyrB; aspartate carbamoyltransferase catalytic subunit; K00609 aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
pyrB; aspartate carbamoyltransferase catalytic subunit (EC:2.1.3.2); K00609 aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] id=14628556 bin=bin8_Chloro species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
pyrB; aspartate carbamoyltransferase catalytic subunit
13_1_40cm_4_scaffold_1714_14
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

13002..14261
DNA (1260bp) protein (420aa)
dihydroorotase, multifunctional complex type (EC:3.5.2.3); K01465 dihydroorotase [EC:3.5.2.3] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
dihydroorotase, multifunctional complex type (EC:3.5.2.3)
Dihydroorotase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CBW4_THET1
13_1_40cm_4_scaffold_1714_15
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

14345..15475
DNA (1131bp) protein (377aa)
carA; carbamoyl-phosphate synthase small subunit CarA (EC:6.3.5.5) Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
carA; carbamoyl phosphate synthase small subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase small chain n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=CARA_SYMTH
13_1_40cm_4_scaffold_1714_16
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

15472..16314
DNA (843bp) protein (281aa)
Phenazine biosynthesis protein PhzF family n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TW71_9CHLR
Phenazine biosynthesis protein PhzF family {ECO:0000313|EMBL:EFH84454.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="
phenazine biosynthesis protein
13_1_40cm_4_scaffold_1714_17
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

16311..19565
DNA (3255bp) protein (1085aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphae
Carbamoyl-phosphate synthase large chain n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C2A6_SPHTD
carbamoyl-phosphate synthase large subunit
13_1_40cm_4_scaffold_1714_18
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

19580..20113
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Natrialba hulunbeirensis JCM 10989 RepID=L9ZQ10_9EURY
hypothetical protein; K09957 hypothetical protein Tax=GWC2_Nitrospirae_57_9_curated
hypothetical protein
13_1_40cm_4_scaffold_1714_19
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20332..22245
DNA (1914bp) protein (638aa)
Peroxinectin {ECO:0000313|EMBL:CEL20263.1}; EC=1.11.1.7 {ECO:0000313|EMBL:CEL20263.1};; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" sour
Peroxidase (EC:1.11.1.7)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI000372D059
13_1_40cm_4_scaffold_1714_20
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

22330..23160
DNA (831bp) protein (277aa)
pyrK; dihydroorotate dehydrogenase, electron transfer subunit; K02823 dihydroorotate dehydrogenase electron transfer subunit Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
oxidoreductase FAD/NAD(P)-binding, dihydroorotate dehydrogenase-like protein; K02823 dihydroorotate dehydrogenase electron transfer subunit id=14628562 bin=bin8_Chloro species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
dihydroorotate dehydrogenase
13_1_40cm_4_scaffold_1714_21
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

23205..24446
DNA (1242bp) protein (414aa)
pyrD; dihydroorotate dehydrogenase 1B (EC:1.3.3.1); K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Dihydroorotate dehydrogenase id=4623273 bin=GWC2_Chloroflexi_73_18 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
diguanylate cyclase
13_1_40cm_4_scaffold_1714_22
unknown

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24443..25075
DNA (633bp) protein (211aa)

This feature has no annotations

13_1_40cm_4_scaffold_1714_23
unknown

Not on your lists

comp(25461..25829)
DNA (369bp) protein (123aa)

This feature has no annotations

13_1_40cm_4_scaffold_1714_24
unknown

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comp(26750..27739)
DNA (990bp) protein (330aa)

This feature has no annotations

13_1_40cm_4_scaffold_1714_25
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(27798..28475)
DNA (678bp) protein (226aa)
kdgA2; KDPG and KHG aldolase (EC:4.1.3.16); K01625 2-dehydro-3-deoxyphosphogluconate aldolase / 4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.16] id=12556058 bin=CNBR_ACIDO species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
2-dehydro-3-deoxyphosphogluconate aldolase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
2-dehydro-3-deoxyphosphogluconate aldolase
13_1_40cm_4_scaffold_1714_26
unknown

Not on your lists

28589..28849
DNA (261bp) protein (87aa)

This feature has no annotations

13_1_40cm_4_scaffold_1714_27
RIFOXYA2_FULL_RIF01_40_8_curated, RIF1, Bacteria

Not on your lists

comp(28854..29867)
DNA (1014bp) protein (338aa)
M24 family peptidase-like protein n=1 Tax=Bacillus cellulosilyticus (strain ATCC 21833 / DSM 2522 / FERM P-1141 / JCM 9156 / N-4) RepID=E6TQD5_BACCJ
creatinase Tax=RIFOXYA2_FULL_RIF01_40_8_curated
M24 family peptidase-like protein
13_1_40cm_4_scaffold_1714_28
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(29915..31087)
DNA (1173bp) protein (391aa)
Xylose isomerase {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609}; EC=5.3.1.5 {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609};; TaxID=485913 species="Bacteria; Chlorof
xylose isomerase (EC:5.3.1.5)
Xylose isomerase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TD36_9CHLR
13_1_40cm_4_scaffold_1714_29
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(31084..31422)
DNA (339bp) protein (113aa)
Cyclase family protein n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B4F4_HERA2
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
cyclase
13_1_40cm_4_scaffold_1714_30
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

31603..32346
DNA (744bp) protein (248aa)
orotate phosphoribosyltransferase; K00762 orotate phosphoribosyltransferase [EC:2.4.2.10] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Orotate phosphoribosyltransferase n=1 Tax=Selenomonas noxia F0398 RepID=G5H2H7_9FIRM
orotate phosphoribosyltransferase
Displaying items 1-30 of 42 in total

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