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13_1_40cm_4_scaffold_2102

Search features with annotation key words

Displaying 26 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_2102_1
unknown

Not on your lists

comp(1..378)
DNA (378bp) protein (126aa)

This feature has no annotations

13_1_40cm_4_scaffold_2102_2
unknown

Not on your lists

comp(386..763)
DNA (378bp) protein (126aa)

This feature has no annotations

13_1_40cm_4_scaffold_2102_3
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(760..1296)
DNA (537bp) protein (179aa)
Sigma-24 (FecI-like) n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IIH1_ANADE
RNA polymerase sigma factor, sigma-70 family Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
sigma-24 FecI-like protein
13_1_40cm_4_scaffold_2102_4
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

1480..2001
DNA (522bp) protein (174aa)
Zn-dependent hydrolase of the beta-lactamase fold-like protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TMW3_9CHLR
beta-lactamase domain-containing protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein
13_1_40cm_4_scaffold_2102_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

1998..2465
DNA (468bp) protein (156aa)
Putative uncharacterized protein id=3963835 bin=GWA2_Methylomirabilis_73_35 species=Leptonema illini genus=Leptonema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Putative uncharacterized protein Tax=GWA2_Rokubacteria_73_35_curated
13_1_40cm_4_scaffold_2102_6
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(2487..3905)
DNA (1419bp) protein (473aa)
Permease of the major facilitator superfamily-like protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UVM7_ROSS1
major facilitator superfamily permease
Permease of the major facilitator superfamily-like protein {ECO:0000313|EMBL:ABQ90680.1}; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Ros
13_1_40cm_4_scaffold_2102_7
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3906..4292
DNA (387bp) protein (129aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
Putative uncharacterized protein id=4611159 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
amino acid-binding ACT domain-containing protein
13_1_40cm_4_scaffold_2102_8
RBG_13_Chloroflexi_60_13_curated, Chloroflexi, Bacteria

Not on your lists


4418..4741
DNA (324bp) protein (108aa)
50S ribosomal protein L21 n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXB9_HALNC
50S ribosomal protein L21; K02888 large subunit ribosomal protein L21 Tax=RBG_13_Chloroflexi_60_13_curated
50S ribosomal protein L21
13_1_40cm_4_scaffold_2102_9
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists


4743..5000
DNA (258bp) protein (86aa)
50S ribosomal protein L27 n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=RL27_PHEZH
50S ribosomal protein L27; K02899 large subunit ribosomal protein L27 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
rpmA; 50S ribosomal protein L27
13_1_40cm_4_scaffold_2102_10

Not on your lists


5005..5262
DNA (258bp) protein (86aa)
50S ribosomal protein L31 {ECO:0000313|EMBL:KKW22940.1}; TaxID=1618856 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_51_12.;"
rpmE; 50S ribosomal protein L31; K02909 large subunit ribosomal protein L31 id=14628280 bin=bin8_Chloro species=Chlorobaculum parvum genus=Chlorobaculum taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=bin8_Chloro organism_group=Chloroflexi
50S ribosomal protein L31
13_1_40cm_4_scaffold_2102_11
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

5289..6170
DNA (882bp) protein (294aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Putative membrane protein id=4803612 bin=GWC2_Chloroflexi_73_18 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
protein of unknown function DUF1385
13_1_40cm_4_scaffold_2102_12
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

6163..7260
DNA (1098bp) protein (366aa)
Peptide chain release factor 1 n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S010_THEOJ
peptide chain release factor 1; K02835 peptide chain release factor 1 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
peptide chain release factor 1 (bRF-1)
13_1_40cm_4_scaffold_2102_13
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(7257..9047)
DNA (1791bp) protein (597aa)
hypothetical protein; K07114 uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
BatB protein id=1251332 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
hypothetical protein
13_1_40cm_4_scaffold_2102_14
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(9044..9820)
DNA (777bp) protein (259aa)
aerotolerance protein BatA n=1 Tax=Alistipes senegalensis RepID=UPI00036ADFFA
von Willebrand factor type A; K07114 uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Mg-chelatase subunit ChlD
13_1_40cm_4_scaffold_2102_15
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(9971..10390)
DNA (420bp) protein (140aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_4_scaffold_2102_16
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(10486..10887)
DNA (402bp) protein (134aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_4_scaffold_2102_17
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(10884..11804)
DNA (921bp) protein (307aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Uncharacterized protein id=4233128 bin=GWA2_Planctomycetia_40_7 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycetia_40_7 organism_group=Planctomycetes
hypothetical protein
13_1_40cm_4_scaffold_2102_18
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(11813..13183)
DNA (1371bp) protein (457aa)
hypothetical protein n=1 Tax=Fervidibacteria bacterium SCGC AAA471-D06 RepID=UPI00035C6F85
AAA ATPase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
ATPase AAA
13_1_40cm_4_scaffold_2102_19
unknown

Not on your lists

comp(13389..14498)
DNA (1110bp) protein (370aa)

This feature has no annotations

13_1_40cm_4_scaffold_2102_20
unknown

Not on your lists

14669..16081
DNA (1413bp) protein (471aa)

This feature has no annotations

13_1_40cm_4_scaffold_2102_21
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

16274..16819
DNA (546bp) protein (182aa)
GCN5-related N-acetyltransferase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CDN6_THET1
N-acetyltransferase GCN5 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
N-acetyltransferase GCN5
13_1_40cm_4_scaffold_2102_22
R_RIF_OD1_07_48_27b, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

16951..17772
DNA (822bp) protein (274aa)
thyA; Thymidylate synthase (EC:2.1.1.45); K00560 thymidylate synthase [EC:2.1.1.45] Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_07_48_27b_curated
thymidylate synthase (EC:2.1.1.45); K00560 thymidylate synthase [EC:2.1.1.45] id=5046293 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
thymidylate synthase (EC:2.1.1.45)
13_1_40cm_4_scaffold_2102_23
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

17726..18802
DNA (1077bp) protein (359aa)
hypothetical protein; K01599 uroporphyrinogen decarboxylase [EC:4.1.1.37] Tax=RBG_16_RIF_WS3X_71_46_curated
Uncharacterized protein id=1250774 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
hypothetical protein
13_1_40cm_4_scaffold_2102_24
RLO_Nitrospirae_42_9, Nitrospirae, Bacteria

Not on your lists

18790..19986
DNA (1197bp) protein (399aa)
hypothetical protein; K09133 hypothetical protein Tax=RifCSPlowO2_12_Nitrospirae_42_9_curated
Uncharacterized protein id=3688633 bin=GWC2_Nitrospirae-rel_56_14 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
hypothetical protein
13_1_40cm_4_scaffold_2102_25
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

19983..21059
DNA (1077bp) protein (359aa)
acuC; Histone deacetylase 1 (EC:3.5.1.98); K04768 acetoin utilization protein AcuC Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Histone deacetylase superfamily protein id=2233619 bin=GWB2_Proteobacteria_55_19 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
histone deacetylase superfamily protein
13_1_40cm_4_scaffold_2102_26
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21056..21952
DNA (897bp) protein (299aa)
Cation diffusion facilitator family transporter n=1 Tax=Thermincola potens (strain JR) RepID=D5X7J1_THEPJ
cation diffusion facilitator family transporter
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:ADG82561.1}; TaxID=635013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Thermincola
Displaying 26 items

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