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13_1_40cm_4_scaffold_2369

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_2369_1
unknown

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3..146
DNA (144bp) protein (48aa)

This feature has no annotations

13_1_40cm_4_scaffold_2369_2
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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164..1198
DNA (1035bp) protein (345aa)
ATPase-like, ParA/MinD n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TD32_9CHLR
nucleotide-binding protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein
13_1_40cm_4_scaffold_2369_3
unknown

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comp(1238..1618)
DNA (381bp) protein (127aa)

This feature has no annotations

13_1_40cm_4_scaffold_2369_4
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

1807..3051
DNA (1245bp) protein (415aa)
Capsular polysaccharide biosynthesis protein n=1 Tax=Pyrococcus sp. (strain NA2) RepID=F4HN33_PYRSN
capsular polysaccharide biosynthesis protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
capsular polysaccharide biosynthesis protein
13_1_40cm_4_scaffold_2369_5
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

3048..4751
DNA (1704bp) protein (568aa)
Integral membrane protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TJK8_9CHLR
Integral membrane protein {ECO:0000313|EMBL:EFH89615.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter rac
13_1_40cm_4_scaffold_2369_6
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4785..5036
DNA (252bp) protein (84aa)
Putative transporter n=1 Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8S229_ACTS5
putative transporter
Permease {ECO:0000313|EMBL:KDP92029.1}; TaxID=1291006 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter cf. michiganensis LMG 26808.;"
13_1_40cm_4_scaffold_2369_7
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

5119..5283
DNA (165bp) protein (55aa)
hypothetical protein; K09791 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein; K09791 hypothetical protein id=14632254 bin=bin9_gal15 species=unknown genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin9_gal15 organism_group=GAL15
hypothetical protein
13_1_40cm_4_scaffold_2369_8
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

5287..5661
DNA (375bp) protein (125aa)
Putative regulatory protein, FmdB family n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NJE4_ROSCS
regulatory protein, FmdB Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
FmdB family regulatory protein
13_1_40cm_4_scaffold_2369_9
GWB2_Deltaproteobacteria_55_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5658..6056)
DNA (399bp) protein (133aa)
Putative uncharacterized protein id=2233561 bin=GWB2_Proteobacteria_55_19 species=uncultured archaeon genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
glyoxalase family protein; K06996 Tax=GWB2_Deltaproteobacteria_55_19_curated
hypothetical protein
13_1_40cm_4_scaffold_2369_10
Moorella thermoacetica, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6165..6812)
DNA (648bp) protein (216aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RJU9_MOOTA
two component LuxR family transcriptional regulator
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ABC19290.1}; TaxID=264732 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella gr
13_1_40cm_4_scaffold_2369_11
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6864..7814)
DNA (951bp) protein (317aa)
Potassium efflux system protein n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1ZIN1_METPB
Potassium efflux system protein {ECO:0000313|EMBL:KEQ54155.1}; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobi
monovalent cation:proton antiporter (CPA2 family) ybaL
13_1_40cm_4_scaffold_2369_12
unknown

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8145..8630
DNA (486bp) protein (162aa)

This feature has no annotations

13_1_40cm_4_scaffold_2369_13
RBG_13_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(8671..9726)
DNA (1056bp) protein (352aa)
Multi-sensor signal transduction histidine kinase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NP17_ROSCS
multi-sensor signal transduction histidine kinase Tax=RBG_13_Chloroflexi_56_8_curated
multi-sensor signal transduction histidine kinase
13_1_40cm_4_scaffold_2369_14
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

9884..11686
DNA (1803bp) protein (601aa)
General secretory pathway protein E id=4832831 bin=GWC2_Chloroflexi_73_18 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
type II secretion system protein E; K02652 type IV pilus assembly protein PilB Tax=GWC2_RIF_CHLX_73_18_curated
type IV pilus assembly protein PilB
13_1_40cm_4_scaffold_2369_15
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

11670..12797
DNA (1128bp) protein (376aa)
Type IV pilus assembly protein PilC id=4832832 bin=GWC2_Chloroflexi_73_18 species=unknown genus=Amycolatopsis taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
pilC; type IV pilus assembly protein PilC; K02653 type IV pilus assembly protein PilC Tax=GWC2_RIF_CHLX_73_18_curated
pilC; type IV pilus assembly protein PilC
13_1_40cm_4_scaffold_2369_16
unknown

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13027..13479
DNA (453bp) protein (151aa)

This feature has no annotations

13_1_40cm_4_scaffold_2369_17
unknown

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13512..14015
DNA (504bp) protein (168aa)

This feature has no annotations

13_1_40cm_4_scaffold_2369_18
unknown

Not on your lists

14012..14764
DNA (753bp) protein (251aa)

This feature has no annotations

13_1_40cm_4_scaffold_2369_19
R_RIF_OD1_06_33_9, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

14852..15319
DNA (468bp) protein (156aa)
prepilin-type N-terminal cleavage/methylation domain-containing protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_06_33_9_curated
hypothetical protein; K02456 general secretion pathway protein G
13_1_40cm_4_scaffold_2369_20
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15316..15789
DNA (474bp) protein (158aa)
Fimbrial family protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TDI9_LEIAQ
Fimbrial family protein {ECO:0000313|EMBL:ERK72777.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
13_1_40cm_4_scaffold_2369_21
unknown

Not on your lists

15797..16447
DNA (651bp) protein (217aa)

This feature has no annotations

13_1_40cm_4_scaffold_2369_22
unknown

Not on your lists

comp(16729..16998)
DNA (270bp) protein (90aa)

This feature has no annotations

13_1_40cm_4_scaffold_2369_23
Thermosinus carboxydivorans, Thermosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

17272..18555
DNA (1284bp) protein (428aa)
Metal dependent phosphohydrolase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HRL7_9FIRM
Metal dependent phosphohydrolase {ECO:0000313|EMBL:EAX47344.1}; Flags: Precursor;; TaxID=401526 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Thermosinus.;" source="T
PAS/PAC sensor-containing diguanylate cyclase
13_1_40cm_4_scaffold_2369_24
Pleurobrachia bachei, Pleurobrachia, Cydippida, Ctenophora, Metazoa

Not on your lists

comp(19087..20523)
DNA (1437bp) protein (479aa)
GVEDin n=1 Tax=Pleurobrachia bachei RepID=M4H1V4_PLEBA
GVEDin {ECO:0000313|EMBL:AFK75410.1}; TaxID=34499 species="Eukaryota; Metazoa; Ctenophora; Typhlocoela; Cydippida; Pleurobrachiidae; Pleurobrachia.;" source="Pleurobrachia bachei (Sea gooseberry).;"
13_1_40cm_4_scaffold_2369_25
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

20684..25651
DNA (4968bp) protein (1656aa)
coiled-coil 1050..1071 id=1246961 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
coiled-coil 1050..1071 Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
13_1_40cm_4_scaffold_2369_26
unknown

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comp(25654..25983)
DNA (330bp) protein (110aa)

This feature has no annotations

13_1_40cm_4_scaffold_2369_27
unknown

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26166..26459
DNA (294bp) protein (98aa)

This feature has no annotations

13_1_40cm_4_scaffold_2369_28
R_RIF_OP11_03_49_14, RIF-OP11-3, Microgenomates, Bacteria

Not on your lists

comp(26539..27630)
DNA (1092bp) protein (364aa)
transmembrane_regions 107..129 id=1246952 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
Uncharacterized protein Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_03_49_14_curated
Displaying 28 items

View Taxonomy