ggKbase home page

13_1_40cm_4_scaffold_2684

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_2684_1
unknown

Not on your lists

comp(3..254)
DNA (252bp) protein (84aa)

This feature has no annotations

13_1_40cm_4_scaffold_2684_2
RIFOXYA1_FULL_Alicyclobacillus_53_8_curated, Firmicutes, Bacteria

Not on your lists

comp(319..2016)
DNA (1698bp) protein (566aa)
TrmH family RNA methyltransferase; K03218 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] Tax=RIFOXYA1_FULL_Alicyclobacillus_53_8_curated
rRNA methylase, putative, group 3 n=1 Tax=Cyanobium gracile (strain ATCC 27147 / PCC 6307) RepID=K9P3Q9_CYAGP
rRNA methylase
13_1_40cm_4_scaffold_2684_3
R_OP11_Daviesbacteria_39_12, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(2019..2243)
DNA (225bp) protein (75aa)
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] Tax=RIFCSPHIGHO2_02_FULL_OP11_Daviesbacteria_39_12_curated
Cysteine--tRNA ligase n=1 Tax=Burkholderia sp. BT03 RepID=J3C355_9BURK
13_1_40cm_4_scaffold_2684_4
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3428..3898)
DNA (471bp) protein (157aa)
2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BX63_9CLOT
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {E
13_1_40cm_4_scaffold_2684_5
Desulfarculus baarsii, Desulfarculus, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3895..4605)
DNA (711bp) protein (237aa)
Bifunctional enzyme IspD/IspF n=1 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QEC1_DESB2
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
Bifunctional enzyme IspD/IspF {ECO:0000256|HAMAP-Rule:MF_01520, ECO:0000256|SAAS:SAAS00096235}; TaxID=644282 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfarculales; Desulfarculaceae;
13_1_40cm_4_scaffold_2684_6
MPI_Anaerolineae_49_20, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(4605..5678)
DNA (1074bp) protein (358aa)
Putative uncharacterized protein n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N2T3_ANATU
Putative uncharacterized protein Tax=MPI_Anaerolineae_49_20
hypothetical protein
13_1_40cm_4_scaffold_2684_7
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5811..7202)
DNA (1392bp) protein (464aa)
DNA repair protein radA n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MEJ2_RHOM4
DNA repair protein RadA
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus ma
13_1_40cm_4_scaffold_2684_8
unknown

Not on your lists

7344..8132
DNA (789bp) protein (263aa)

This feature has no annotations

13_1_40cm_4_scaffold_2684_9
RBG_13_Actinobacteria_55_18_curated, Actinobacteria, Bacteria

Not on your lists

comp(8158..9150)
DNA (993bp) protein (331aa)
PT repeat-containing protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EDL0_9CHLR
hypothetical protein Tax=RBG_13_Actinobacteria_55_18_curated
hypothetical protein
13_1_40cm_4_scaffold_2684_10
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9218..10897
DNA (1680bp) protein (560aa)
Transcriptional regulator, LuxR family n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4ESB2_MODMB
LuxR family transcriptional regulator
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:CCH86275.1}; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter m
13_1_40cm_4_scaffold_2684_11
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(10894..11322)
DNA (429bp) protein (143aa)
N-acetyltransferase GCN5 Tax=RBG_16_RIF_CHLX_70_13_curated
GCN5-related N-acetyltransferase id=2552368 bin=GWA1_Deltaproteobacteria_52_35 species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
N-acetyltransferase GCN5
Displaying 11 items

View Taxonomy