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13_1_40cm_4_scaffold_2726

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_2726_1
unknown

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comp(1..171)
DNA (171bp) protein (57aa)

This feature has no annotations

13_1_40cm_4_scaffold_2726_2
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

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425..685
DNA (261bp) protein (87aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
hypothetical protein
13_1_40cm_4_scaffold_2726_3
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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comp(720..2378)
DNA (1659bp) protein (553aa)
putative glycosidase (EC:3.2.1.-) Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Amylopullulanase id=4319235 bin=GWC2_Nitrospirae-rel_56_14 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
glycoside hydrolase, family 57
13_1_40cm_4_scaffold_2726_4
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

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comp(2375..3946)
DNA (1572bp) protein (524aa)
lysyl-tRNA synthetase, class I (EC:6.1.1.6) Tax=RBG_16_RIF_CHLX_70_13_curated
lysine--tRNA ligase (EC:6.1.1.6)
Lysine--tRNA ligase id=4786767 bin=GWC2_Chloroflexi_73_18 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
13_1_40cm_4_scaffold_2726_5
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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comp(3952..4419)
DNA (468bp) protein (156aa)
Transcription elongation factor GreA n=1 Tax=Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR) RepID=F0SWB1_SYNGF
GreA/GreB family elongation factor; K03624 transcription elongation factor GreA Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
transcription elongation factor GreA
13_1_40cm_4_scaffold_2726_6
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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comp(4724..6814)
DNA (2091bp) protein (697aa)
penicillin-binding protein 2 (EC:2.4.1.129)
Penicillin-binding protein 2 n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C6L1_SPHTD
penicillin-binding protein 2; K05515 penicillin-binding protein 2 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_4_scaffold_2726_7
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

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comp(6854..8386)
DNA (1533bp) protein (511aa)
ggt; gamma-glutamyltransferase (EC:2.3.2.2)
Gamma-glutamyltransferase {ECO:0000313|EMBL:ACM04943.1}; EC=2.3.2.2 {ECO:0000313|EMBL:ACM04943.1};; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.
Gamma-glutamyltransferase n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KYQ4_THERP
13_1_40cm_4_scaffold_2726_8
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8462..8629)
DNA (168bp) protein (56aa)
Trypsin-like serine protease with C-terminal PDZ domain {ECO:0000313|EMBL:EIM27898.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga
Displaying 8 items

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