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13_1_40cm_4_scaffold_3260

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_3260_1
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..294
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0PR24_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQB90152.1}; TaxID=1354301 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BL8.;"
hypothetical protein
13_1_40cm_4_scaffold_3260_2
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(664..1509)
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SC45_GEOOG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB74213.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (s
13_1_40cm_4_scaffold_3260_3
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(1506..2423)
DNA (918bp) protein (306aa)
ABC-type transport system, ATPase component id=3327051 bin=GWC2_Chloroflexi_73_18 species=Deinococcus geothermalis genus=Deinococcus taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
ABC transporter; K01990 ABC-2 type transport system ATP-binding protein Tax=GWC2_RIF_CHLX_73_18_curated
ABC transporter
13_1_40cm_4_scaffold_3260_4
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2420..3517)
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RIP2_BLASD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCG02236.1}; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strai
13_1_40cm_4_scaffold_3260_5
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

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comp(3514..4119)
DNA (606bp) protein (202aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XE38_NAKMY
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACV79741.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multi
13_1_40cm_4_scaffold_3260_6
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

4122..4682
DNA (561bp) protein (187aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_4_scaffold_3260_7
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

4663..5922
DNA (1260bp) protein (420aa)
3-oxoacyl-(acyl-carrier-protein) synthase II (EC:2.3.1.41); K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
3-oxoacyl-(acyl-carrier-protein) synthase II (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SJD6_THEM7
13_1_40cm_4_scaffold_3260_8
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

5915..6382
DNA (468bp) protein (156aa)
acetyl-CoA carboxylase biotin carboxyl carrier protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Acetyl-CoA carboxylase, biotin carboxyl carrier protein id=2457164 bin=GWC2_Chloroflexi_73_18 species=Chloroflexus aggregans genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
acetyl-CoA carboxylase biotin carboxyl carrier protein
13_1_40cm_4_scaffold_3260_9
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

6379..6549
DNA (171bp) protein (57aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_4_scaffold_3260_10
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6646..7062
DNA (417bp) protein (139aa)
Response regulator receiver protein n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UHS6_ANASK
Response regulator receiver domain protein (CheY-like) {ECO:0000313|EMBL:EYF00852.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; C
response regulator receiver protein
13_1_40cm_4_scaffold_3260_11
Rhodopirellula sp. SWK7, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(7059..7688)
DNA (630bp) protein (210aa)
Protein containing Diguanylate cyclase, predicted n=1 Tax=Rhodopirellula sp. SWK7 RepID=M5T6I5_9PLAN
Protein containing Diguanylate cyclase, predicted {ECO:0000313|EMBL:EMI44857.1}; TaxID=595460 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;"
GAF sensor-containing diguanylate cyclase
13_1_40cm_4_scaffold_3260_12
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(7818..8417)
DNA (600bp) protein (200aa)
Natural resistance-associated macrophage protein n=1 Tax=Caldicellulosiruptor obsidiansis (strain ATCC BAA-2073 / strain OB47) RepID=D9TIU9_CALOO
natural resistance-associated macrophage protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
natural resistance-associated macrophage protein
13_1_40cm_4_scaffold_3260_13
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(8366..9028)
DNA (663bp) protein (221aa)
Natural resistance-associated macrophage protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EJK8_9CHLR
natural resistance-associated macrophage protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
natural resistance-associated macrophage protein
13_1_40cm_4_scaffold_3260_14
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(9038..10276)
DNA (1239bp) protein (413aa)
Mg/Co/Ni transporter MgtE (contains CBS domain) Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
MgtE intracellular region id=4168141 bin=GWC2_Nitrospirae-rel_56_14 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
Mg/Co/Ni transporter MgtE (contains CBS domain)
13_1_40cm_4_scaffold_3260_15
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

10334..11197
DNA (864bp) protein (288aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
TPR repeat-containing protein id=4729359 bin=GWC2_Chloroflexi_73_18 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
13_1_40cm_4_scaffold_3260_16
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

11194..12963
DNA (1770bp) protein (590aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_4_scaffold_3260_17
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

13109..15223
DNA (2115bp) protein (705aa)
id=14629896 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
id=4729358 bin=GWC2_Chloroflexi_73_18 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Displaying 17 items

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