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13_1_40cm_4_scaffold_3992

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_3992_1
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

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3..2036
DNA (2034bp) protein (678aa)
ClpC ATPase; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC id=14630136 bin=bin8_Chloro species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
ClpC ATPase; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC Tax=CSP1_4_Chloroflexi
ClpC ATPase
13_1_40cm_4_scaffold_3992_2
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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2090..3445
DNA (1356bp) protein (452aa)
DNA repair protein radA n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CMD3_DESK7
DNA repair protein RadA
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=760568 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum kuznetsovii
13_1_40cm_4_scaffold_3992_3
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

3529..4602
DNA (1074bp) protein (358aa)
hypothetical protein Tax=RBG_16_RIF_CHLX_72_14_curated
hypothetical protein id=14630134 bin=bin8_Chloro species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein
13_1_40cm_4_scaffold_3992_4
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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4603..5262
DNA (660bp) protein (220aa)
Bifunctional enzyme IspD/IspF n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JDH2_ANAD2
2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase
Bifunctional enzyme IspD/IspF {ECO:0000256|HAMAP-Rule:MF_01520, ECO:0000256|SAAS:SAAS00096235}; TaxID=455488 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Ana
13_1_40cm_4_scaffold_3992_5
Firmicutes bacterium CAG:102, Firmicutes, Bacteria

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5259..5741
DNA (483bp) protein (161aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Firmicutes bacterium CAG:102 RepID=R5AIC4_9FIRM
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {E
ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
13_1_40cm_4_scaffold_3992_6
uncultured Acetothermia bacterium, Acetothermia, Bacteria

Not on your lists

5751..7160
DNA (1410bp) protein (470aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:00
Cysteine--tRNA ligase n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SEV4_9BACT
cysteinyl-tRNA synthetase
13_1_40cm_4_scaffold_3992_7
RIFOXYA1_FULL_Alicyclobacillus_53_8_curated, Firmicutes, Bacteria

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7186..8409
DNA (1224bp) protein (408aa)
TrmH family RNA methyltransferase; K03218 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] Tax=RIFOXYA1_FULL_Alicyclobacillus_53_8_curated
rlmB; putative 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB (EC:2.1.1.-)
Putative 23S rRNA (Guanosine-2'-O-)-methyltransferase RlmB n=1 Tax=Selenomonas ruminantium subsp. lactilytica (strain NBRC 103574 / TAM6421) RepID=I0GNZ2_SELRL
13_1_40cm_4_scaffold_3992_8
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

Not on your lists

comp(8406..9179)
DNA (774bp) protein (258aa)
Acetyltransferase (GNAT) family protein n=1 Tax=Thermococcus onnurineus (strain NA1) RepID=B6YX33_THEON
Acetyltransferase, GNAT family Tax=RBG_16_Chloroflexi_54_18_curated
Acetyltransferase (GNAT) family protein
13_1_40cm_4_scaffold_3992_trna_1
unknown

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9417..9488
DNA (72bp)
transferRNA
13_1_40cm_4_scaffold_3992_9
RBG_13_Chloroflexi_48_17_curated, Chloroflexi, Bacteria

Not on your lists

comp(9948..10469)
DNA (522bp) protein (174aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C482_SPHTD
two component transcriptional regulator, LuxR family Tax=RBG_13_Chloroflexi_48_17_curated
two component transcriptional regulator, LuxR family
13_1_40cm_4_scaffold_3992_10
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10565..11356)
DNA (792bp) protein (264aa)
Conserved uncharacterized protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FE99_STIAD
Putative Arylesterase-related protein {ECO:0000313|EMBL:EYF06061.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" so
hypothetical protein
13_1_40cm_4_scaffold_3992_11
unknown

Not on your lists

11410..11817
DNA (408bp) protein (136aa)

This feature has no annotations

13_1_40cm_4_scaffold_3992_12
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

11799..12131
DNA (333bp) protein (111aa)
hypothetical protein Tax=RBG_16_Chloroflexi_57_11_curated
13_1_40cm_4_scaffold_3992_13
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

12152..14308
DNA (2157bp) protein (719aa)
Putative uncharacterized protein n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RI82_9ACTO
hypothetical protein Tax=RBG_16_Chloroflexi_57_11_curated
hypothetical protein
Displaying 14 items

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