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13_1_40cm_4_scaffold_4056

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_4056_1
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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1..645
DNA (645bp) protein (215aa)
hypothetical protein n=1 Tax=Candidatus Microgenomatus auricola SCGC AAA011-E14 RepID=UPI00036D4835
secF; protein-export membrane protein SecF; K03074 preprotein translocase subunit SecF Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
secF; protein-export membrane protein SecF
13_1_40cm_4_scaffold_4056_2
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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731..1780
DNA (1050bp) protein (350aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Uncharacterized protein id=4140756 bin=GWC2_Nitrospirae_57_13 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
13_1_40cm_4_scaffold_4056_3
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

1816..2190
DNA (375bp) protein (125aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_4_scaffold_4056_4
unknown

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2187..2603
DNA (417bp) protein (139aa)

This feature has no annotations

13_1_40cm_4_scaffold_4056_5
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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2604..4553
DNA (1950bp) protein (650aa)
ftsH; cell division protein FtsH (EC:3.4.24.-) Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
ftsH; cell division protein FtsH (EC:3.4.24.-)
Cell division protein FtsH n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L525_THERP
13_1_40cm_4_scaffold_4056_6
CG_CPR16-01, CG_CPR16, Bacteria

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comp(4554..5888)
DNA (1335bp) protein (445aa)
id=2365868 Tax=CG_CPR16-01
id=2365868 bin=GWD1_TM7_39_7 species=GWE2_WS6_33_161 genus=GWE2_WS6_33_161 taxon_order=GWE2_WS6_33_161 taxon_class=GWE2_WS6_33_161 phylum=WS6 tax=GWD1_TM7_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D2_39_7
13_1_40cm_4_scaffold_4056_7
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

5928..7691
DNA (1764bp) protein (588aa)
single-stranded-DNA-specific exonuclease RecJ; K07462 single-stranded-DNA-specific exonuclease [EC:3.1.-.-] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Single-stranded-DNA-specific exonuclease id=2204079 bin=GWB2_Chloroflexi_49_20 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
single-stranded-DNA-specific exonuclease RecJ
13_1_40cm_4_scaffold_4056_8
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7531..9093)
DNA (1563bp) protein (521aa)
Uncharacterized protein n=1 Tax=Cronobacter dublinensis 582 RepID=K8BIP9_9ENTR
Uncharacterized protein Tax=RBG_16_Gammaproteobacteria_62_13__curated
13_1_40cm_4_scaffold_4056_9
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

9321..9905
DNA (585bp) protein (195aa)
(p)ppGpp synthetase I SpoT/RelA (EC:2.7.6.5); K00951 GTP pyrophosphokinase [EC:2.7.6.5] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
(p)ppGpp synthetase I SpoT/RelA (EC:2.7.6.5)
(P)ppGpp synthetase I, SpoT/RelA id=3825037 bin=GWC2_Chloroflexi_73_18 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
13_1_40cm_4_scaffold_4056_10
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

9920..11758
DNA (1839bp) protein (613aa)
GTP-binding protein TypA n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UPI8_ROSS1
GTP-binding protein TypA; K06207 GTP-binding protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
GTP-binding protein TypA
13_1_40cm_4_scaffold_4056_11
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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11802..12623
DNA (822bp) protein (274aa)
Alpha/beta hydrolase fold protein n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F502_VERMA
Micromonospora carbonacea strain JXNU-1 contig2, whole genome shotgun sequence {ECO:0000313|EMBL:KIR63107.1}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micr
alpha/beta hydrolase fold protein
13_1_40cm_4_scaffold_4056_12
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13781..14407
DNA (627bp) protein (209aa)
Peptidase S9 prolyl oligopeptidase active site domain protein n=1 Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A8A0_THECD
peptidase S9 prolyl oligopeptidase active site domain-containing protein
Peptidase S9 prolyl oligopeptidase active site domain protein {ECO:0000313|EMBL:ACZ00415.1}; TaxID=471852 species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;
13_1_40cm_4_scaffold_4056_13
unknown

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14498..14836
DNA (339bp) protein (113aa)

This feature has no annotations

13_1_40cm_4_scaffold_4056_14
unknown

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14833..15030
DNA (198bp) protein (66aa)

This feature has no annotations

13_1_40cm_4_scaffold_4056_15
unknown

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15027..16127
DNA (1101bp) protein (367aa)

This feature has no annotations

13_1_40cm_4_scaffold_4056_16
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(16134..16712)
DNA (579bp) protein (193aa)
korB; 2-oxoglutarate synthase subunit beta (EC:1.2.7.3) Tax=RBG_16_Archaea_50_20_curated
2-oxoglutarate ferredoxin oxidoreductase subunit beta (EC:1.2.7.3)
hypothetical protein n=1 Tax=unclassified candidate division pSL4 RepID=UPI00036441CB
13_1_40cm_4_scaffold_4056_17
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(17039..17329)
DNA (291bp) protein (97aa)
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
korA; 2-oxoglutarate synthase subunit alpha (EC:1.2.7.3)
2-oxoglutarate ferredoxin oxidoreductase subunit alpha n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SVM2_9BACT
Displaying 17 items

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