ggKbase home page

13_1_40cm_4_scaffold_409

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_409_1
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(3..491)
DNA (489bp) protein (163aa)
Dolichyl-phosphate mannose synthase related protein n=1 Tax=uncultured bacterium 259 RepID=E3T6R0_9BACT
glycosyl transferase family protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
family 2 glycosyl transferase
13_1_40cm_4_scaffold_409_2
GWF2_OD1_43_32, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(499..1326)
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FK71_DESAA
Methyltransferase family protein {ECO:0000313|EMBL:KKT13249.1}; TaxID=1618643 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Falkowbacteria) bacterium GW2011_GWF2_43_32.;"
hypothetical protein
13_1_40cm_4_scaffold_409_3
Desulfurivibrio alkaliphilus, Desulfurivibrio, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1349..2614
DNA (1266bp) protein (422aa)
C-methyltransferase n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6YZS7_DESAT
C-methyltransferase
C-methyltransferase {ECO:0000313|EMBL:ADH85084.1}; TaxID=589865 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfurivibrio.;" source="Desulfurivibrio
13_1_40cm_4_scaffold_409_4

Not on your lists

2629..3009
DNA (381bp) protein (127aa)
Cupin 2 conserved barrel domain protein n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM2304) RepID=B5ZXM7_RHILW
Marine sediment metagenome DNA, contig: S01H1_S13126 {ECO:0000313|EMBL:GAG02193.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
cupin
13_1_40cm_4_scaffold_409_5
RBG_16_Chloroflexi_48_8_curated, Chloroflexi, Bacteria

Not on your lists

3009..4142
DNA (1134bp) protein (378aa)
perosamine synthetase (EC:2.6.1.-); K00837 [EC:2.6.1.-] Tax=RBG_16_Chloroflexi_48_8_curated
sat:SYN_00827 perosamine synthetase (EC:2.6.1.-); K00837 [EC:2.6.1.-] id=1244953 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
perosamine synthetase (EC:2.6.1.-)
13_1_40cm_4_scaffold_409_6
RBG_16_Chloroflexi_48_8_curated, Chloroflexi, Bacteria

Not on your lists

4139..4906
DNA (768bp) protein (256aa)
SAM-dependent methyltransferase Tax=RBG_16_Chloroflexi_48_8_curated
SAM-dependent methyltransferase id=1244952 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
SAM-dependent methyltransferase
13_1_40cm_4_scaffold_409_7
RBG_16_Nitrospirae_43_11_curated, Nitrospirae, Bacteria

Not on your lists

4885..6132
DNA (1248bp) protein (416aa)
Uncharacterized protein n=1 Tax=Vibrio coralliilyticus OCN008 RepID=U0ET76_9VIBR
hexosyltransferase; glycosyltransferase Tax=RBG_16_Nitrospirae_43_11_curated
glycosyl transferase
13_1_40cm_4_scaffold_409_8
unknown

Not on your lists

6129..7268
DNA (1140bp) protein (380aa)

This feature has no annotations

13_1_40cm_4_scaffold_409_9
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

7265..8638
DNA (1374bp) protein (458aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI00031C349C
D-alanine export protein
Putative membrane protein involved in D-alanine export {ECO:0000313|EMBL:AGA29945.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaer
13_1_40cm_4_scaffold_409_10
CG_Delta_03, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8652..9371
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Kordia algicida OT-1 RepID=A9EBP7_9FLAO
type 11 methyltransferase Tax=CG_Delta_03
13_1_40cm_4_scaffold_409_11
Desulfovibrio alkalitolerans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9511..10578)
DNA (1068bp) protein (356aa)
Glycosyl transferase family 2 n=1 Tax=Desulfovibrio alkalitolerans DSM 16529 RepID=S7T234_9DELT
Glycosyl transferase family 2 {ECO:0000313|EMBL:EPR30575.1}; TaxID=1121439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Des
family 2 glycosyl transferase
13_1_40cm_4_scaffold_409_12
Candidatus Desulforudis audaxviator, Candidatus Desulforudis, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10755..12164)
DNA (1410bp) protein (470aa)
Integral membrane protein MviN n=1 Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I6B0_DESAP
integral membrane protein MviN
Putative lipid II flippase MurJ {ECO:0000256|PIRNR:PIRNR002869}; TaxID=477974 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Candidatus Desulforudis.;" source="Desulforudis
13_1_40cm_4_scaffold_409_13
Leptospirillum ferriphilum, Leptospirillum, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(12199..12912)
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=unclassified candidate division EM 19 RepID=UPI00036C35F0
Uncharacterized protein {ECO:0000313|EMBL:AIA31694.1}; TaxID=1441628 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Leptospirillum.;" source="Leptospirillum ferriphilum YSK.;"
SAM-dependent methyltransferase
13_1_40cm_4_scaffold_409_14
R_OD1_Yanofskybacteria_41_21, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

13186..13935
DNA (750bp) protein (250aa)
Methyltransferase n=1 Tax=uncultured bacterium RepID=K2EV31_9BACT
methyltransferase Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_41_21_curated
methyltransferase
13_1_40cm_4_scaffold_409_15
unknown

Not on your lists

13937..14122
DNA (186bp) protein (62aa)
UDP-glucose 4-epimerase
13_1_40cm_4_scaffold_409_16
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

14119..15795
DNA (1677bp) protein (559aa)
Uncharacterized protein n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B762_HERA2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX06345.1}; Flags: Precursor;; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Her
13_1_40cm_4_scaffold_409_17
unknown

Not on your lists

comp(15603..16145)
DNA (543bp) protein (181aa)

This feature has no annotations

13_1_40cm_4_scaffold_409_18
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16330..16701
DNA (372bp) protein (124aa)
NAD-dependent epimerase/dehydratase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] id=14632433 bin=bin9_gal15 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15
galE-4; UDP-glucose 4-epimerase (EC:5.1.3.2)
Uncharacterized protein {ECO:0000313|EMBL:KFA90462.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cy
Displaying 18 items

View Taxonomy