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13_1_40cm_4_scaffold_4436

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_4436_1
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..349
DNA (348bp) protein (116aa)
tRNA pseudouridine synthase B (EC:4.2.1.70)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000313|EMBL:CDM24995.1}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:M
tRNA pseudouridine synthase B n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=TRUB_AROAE
13_1_40cm_4_scaffold_4436_2
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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359..1762
DNA (1404bp) protein (468aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I0M9_CALAS
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein
13_1_40cm_4_scaffold_4436_3
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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1783..2565
DNA (783bp) protein (261aa)
riboflavin biosynthesis protein RibF; K11753 riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Riboflavin biosynthesis protein ribF n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EEE8_9CHLR
riboflavin biosynthesis protein RibF
13_1_40cm_4_scaffold_4436_4
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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2829..3098
DNA (270bp) protein (90aa)
30S ribosomal protein S15 n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4ED77_9CHLR
30S ribosomal protein S15; K02956 small subunit ribosomal protein S15 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
30S ribosomal protein S15
13_1_40cm_4_scaffold_4436_5
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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3194..5404
DNA (2211bp) protein (737aa)
pnp; polynucleotide phosphorylase; K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S3L0_THEOJ
13_1_40cm_4_scaffold_4436_6
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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5866..6639
DNA (774bp) protein (258aa)
putative glycosyltransferase (EC:2.4.-.-) id=1247643 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
putative glycosyltransferase (EC:2.4.-.-)
glycosyl transferase family 2 protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_4_scaffold_4436_7
R_Acidobacteria_59_13, Acidobacteria, Bacteria

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6636..7436
DNA (801bp) protein (267aa)
Cel operon protein n=1 Tax=Candidatus Chloracidobacterium thermophilum RepID=A8DJH6_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
hypothetical protein
13_1_40cm_4_scaffold_4436_8
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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7535..8098
DNA (564bp) protein (188aa)
Methyltransferase type 12 n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XKN1_NAKMY
type 12 methyltransferase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
type 12 methyltransferase
13_1_40cm_4_scaffold_4436_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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8098..9549
DNA (1452bp) protein (484aa)
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase id=4006797 bin=GWC2_Methylomirabilis_70_16 species=Methanobacterium sp. Maddingley MBC34 genus=Methanobacterium taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
glycosyl transferase Tax=GWC2_Rokubacteria_70_16_curated
hypothetical protein
13_1_40cm_4_scaffold_4436_10
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

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comp(9546..10460)
DNA (915bp) protein (305aa)
F420-dependent oxidoreductase id=14632488 bin=bin9_gal15 species=Natronorubrum bangense genus=Natronorubrum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=bin9_gal15 organism_group=GAL15
F420-dependent oxidoreductase Tax=CSP1_3_Armatimonadetes
oxidoreductase
13_1_40cm_4_scaffold_4436_11
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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10505..11134
DNA (630bp) protein (210aa)
phage SPO1 DNA polymerase-like protein; K02334 DNA polymerase bacteriophage-type [EC:2.7.7.7] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Phage SPO1 DNA polymerase-related protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C2B2_SPHTD
phage SPO1 DNA polymerase-like protein
13_1_40cm_4_scaffold_4436_12
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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11131..12786
DNA (1656bp) protein (552aa)
RNA-metabolising metallo-beta-lactamase; K12574 ribonuclease J [EC:3.1.-.-] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
RNA-metabolising metallo-beta-lactamase n=1 Tax=Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) RepID=D7CM71_SYNLT
RNA-metabolising metallo-beta-lactamase
13_1_40cm_4_scaffold_4436_13
unknown

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comp(12790..13200)
DNA (411bp) protein (137aa)

This feature has no annotations

13_1_40cm_4_scaffold_4436_14
unknown

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comp(13346..13648)
DNA (303bp) protein (101aa)

This feature has no annotations

13_1_40cm_4_scaffold_4436_15
R_OP11_Woesebacteria_38_26b, Woesebacteria, Microgenomates, Bacteria

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15018..15479
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2CYZ9_9BACT
DNA translocase FtsK; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family Tax=RIFCSPHIGHO2_01_FULL_OP11_Woesebacteria_38_26b_curated
cell division FtsK/SpoIIIE
13_1_40cm_4_scaffold_4436_16
GWC1_OP11_40_9, Daviesbacteria, Microgenomates, Bacteria

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15551..15997
DNA (447bp) protein (149aa)
DNA translocase ftsK n=1 Tax=Sporosarcina ureae RepID=FTSK_SPOUR id=44002 bin=ACD38 species=Sporosarcina ureae genus=Sporosarcina taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
Cell division FtsK/SpoIIIE {ECO:0000313|EMBL:KKR80727.1}; TaxID=1618430 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWC1_40_9.;"
FtsK/SpoIIIE family protein
13_1_40cm_4_scaffold_4436_17
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

15994..16713
DNA (720bp) protein (240aa)
XRE family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein id=14629012 bin=bin8_Chloro species=Kiloniella laminariae genus=Kiloniella taxon_order=Kiloniellales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin8_Chloro organism_group=Chloroflexi
XRE family transcriptional regulator
Displaying 17 items

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