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13_1_40cm_4_scaffold_6254

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_6254_1
Streptomyces olindensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(213..626)
DNA (414bp) protein (138aa)
alpha/beta hydrolase n=1 Tax=Streptomyces prunicolor RepID=UPI00036FBDC0
Alpha/beta hydrolase {ECO:0000313|EMBL:KDN79460.1}; TaxID=358823 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces olindensis.;"
hypothetical protein
13_1_40cm_4_scaffold_6254_2
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(1142..1801)
DNA (660bp) protein (220aa)
Crp/Fnr family transcriptional regulator Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
Crp/Fnr family transcriptional regulator
13_1_40cm_4_scaffold_6254_3
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

2004..2999
DNA (996bp) protein (332aa)
Transcriptional regulator, LuxR family n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CAZ4_SPHTD
transcriptional regulator, LuxR family
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:ACZ39941.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaero
13_1_40cm_4_scaffold_6254_4
unknown

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comp(3121..3435)
DNA (315bp) protein (105aa)

This feature has no annotations

13_1_40cm_4_scaffold_6254_trna_1
unknown

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comp(3760..3830)
DNA (71bp)
transferRNA
13_1_40cm_4_scaffold_6254_5
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(3873..5234)
DNA (1362bp) protein (454aa)
Uncharacterized protein n=1 Tax=Frankia sp. CN3 RepID=G6H2J2_9ACTO
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein
13_1_40cm_4_scaffold_6254_6
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(5318..6871)
DNA (1554bp) protein (518aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I132_9RHIZ
conserved hypothetical protein; putative membrane protein; putative TctA subunit of the Tripartite Tricarboxylate Transport(TTT) Family Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
tricarboxylate transporter
13_1_40cm_4_scaffold_6254_7
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(6871..7320)
DNA (450bp) protein (150aa)
Small permease of tripartite tricarboxylate transporter n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2J855_9BURK
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
tctB; small permease of tripartite tricarboxylate transporter (TctB)
13_1_40cm_4_scaffold_6254_8
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(7355..7561)
DNA (207bp) protein (69aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HQ61_9RHIZ
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein
13_1_40cm_4_scaffold_6254_9
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(7584..8300)
DNA (717bp) protein (239aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I134_9RHIZ
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein
13_1_40cm_4_scaffold_6254_10
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

8467..8745
DNA (279bp) protein (93aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_4_scaffold_6254_11
unknown

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comp(8742..10082)
DNA (1341bp) protein (447aa)

This feature has no annotations

13_1_40cm_4_scaffold_6254_12
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

10128..11921
DNA (1794bp) protein (598aa)
pyruvate dehydrogenase E1 component, homodimeric type (EC:1.2.4.1); K00163 pyruvate dehydrogenase E1 component [EC:1.2.4.1] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
pyruvate dehydrogenase E1 component, homodimeric type (EC:1.2.4.1); K00163 pyruvate dehydrogenase E1 component [EC:1.2.4.1] id=24546726 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
pyruvate dehydrogenase E1 component, homodimeric type (EC:1.2.4.1)
13_1_40cm_4_scaffold_6254_13
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

11867..12802
DNA (936bp) protein (312aa)
pyruvate dehydrogenase E1 component, homodimeric type (EC:1.2.4.1); K00163 pyruvate dehydrogenase E1 component [EC:1.2.4.1] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
pyruvate dehydrogenase E1 component, homodimeric type (EC:1.2.4.1)
Pyruvate dehydrogenase E1 component id=4555952 bin=GWC2_Chloroflexi_73_18 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
13_1_40cm_4_scaffold_6254_14
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

12795..13259
DNA (465bp) protein (155aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_4_scaffold_6254_15
unknown

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13352..13825
DNA (474bp) protein (158aa)

This feature has no annotations

13_1_40cm_4_scaffold_6254_16
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

13829..15133
DNA (1305bp) protein (435aa)
HD domain protein n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KXP0_THERP
HD domain-containing protein Tax=RBG_16_Chloroflexi_56_8_curated
HD domain-containing protein
13_1_40cm_4_scaffold_6254_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

15093..15557
DNA (465bp) protein (155aa)
Thioesterase superfamily protein n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UE54_ANASK
thioesterase superfamily protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
thioesterase superfamily protein
13_1_40cm_4_scaffold_6254_18
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(15558..16220)
DNA (663bp) protein (221aa)
Phage SPO1 DNA polymerase-related protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IL95_KORVE
phage SPO1 DNA polymerase-related protein
Phage SPO1 DNA polymerase-related protein {ECO:0000313|EMBL:ABF42355.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter
13_1_40cm_4_scaffold_6254_19
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

comp(16189..16434)
DNA (246bp) protein (82aa)
hypothetical protein id=14628898 bin=bin8_Chloro species=Variovorax paradoxus genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein Tax=CSP1_4_Chloroflexi
hypothetical protein
13_1_40cm_4_scaffold_6254_20
unknown

Not on your lists

16556..16924
DNA (369bp) protein (123aa)

This feature has no annotations

13_1_40cm_4_scaffold_6254_21
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

comp(17030..17272)
DNA (243bp) protein (81aa)
ATPase n=1 Tax=Salinispora pacifica RepID=UPI000364242E
hypothetical protein
Gll1436 protein {ECO:0000313|EMBL:BAC89377.1}; TaxID=251221 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).;"
13_1_40cm_4_scaffold_6254_22
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

comp(17437..17790)
DNA (354bp) protein (118aa)
ArsR family transcriptional regulatory protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NKP0_GLOVI
transcription regulator ArsR
ArsR family transcriptional regulatory protein {ECO:0000313|EMBL:BAC89378.1}; TaxID=251221 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceu
13_1_40cm_4_scaffold_6254_23
RBG_13_Chloroflexi_46_9_curated, Chloroflexi, Bacteria

Not on your lists

17919..18302
DNA (384bp) protein (128aa)
GNAT family acetyltransferase (EC:2.3.1.-) Tax=RBG_13_Chloroflexi_46_9_curated
GCN5-related N-acetyltransferase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TDA6_9CHLR
GCN5-related N-acetyltransferase
Displaying 24 items

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