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13_1_40cm_4_scaffold_6423

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Displaying 24 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_6423_1
Mycobacterium gilvum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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2..349
DNA (348bp) protein (116aa)
Superoxide dismutase n=2 Tax=Mycobacterium gilvum RepID=A4T6H7_MYCGI
superoxide dismutase
Superoxide dismutase {ECO:0000313|EMBL:ABP43617.1}; TaxID=350054 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium gilvum (strain PYR-GCK)
13_1_40cm_4_scaffold_6423_2

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349..672
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Actinopolyspora mortivallis RepID=UPI00037C7A00
Signal peptidase I {ECO:0000313|EMBL:EQD47062.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
putative phage repressor
13_1_40cm_4_scaffold_6423_3
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

682..933
DNA (252bp) protein (84aa)
Putative uncharacterized protein n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6I0R8_9BACT
Fe-S cluster protector protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Fe-S cluster protector protein
13_1_40cm_4_scaffold_6423_4
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

933..1736
DNA (804bp) protein (268aa)
Gas vesicle synthesis GvpLGvpF n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INZ8_KORVE
gas vesicle synthesis GvpLGvpF Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Gas vesicle synthesis GvpLGvpF
13_1_40cm_4_scaffold_6423_5
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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1744..2070
DNA (327bp) protein (109aa)
Gas vesicle G n=1 Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I4U1_DESAP
Gas vesicle G Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
gas vesicle G
13_1_40cm_4_scaffold_6423_6
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

2067..2882
DNA (816bp) protein (272aa)
Gas vesicle synthesis protein n=1 Tax=Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057) RepID=F8JX46_STREN
gas vesicle synthesis protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Gas vesicle synthesis protein
13_1_40cm_4_scaffold_6423_7
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

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2879..3118
DNA (240bp) protein (80aa)
Putative uncharacterized protein n=1 Tax=Pelodictyon luteolum (strain DSM 273) RepID=Q3B4Z9_PELLD
hypothetical protein
hypothetical protein Tax=RBG_16_Planctomycetes_55_9_curated
13_1_40cm_4_scaffold_6423_8
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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3115..3843
DNA (729bp) protein (243aa)
Gas vesicle synthesis GvpLGvpF n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C249_SPHTD
gas vesicle synthesis protein GvpLGvpF
Gas vesicle synthesis GvpLGvpF {ECO:0000313|EMBL:ACZ38316.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;
13_1_40cm_4_scaffold_6423_9
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

3840..4166
DNA (327bp) protein (109aa)
Gas vesicle K n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INZ3_KORVE
gas vesicle K Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
gas vesicle K
13_1_40cm_4_scaffold_6423_10
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

4163..4480
DNA (318bp) protein (106aa)
Gas vesicle structural protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INZ4_KORVE
gas vesicle protein GVPa Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
gas vesicle protein GVPa
13_1_40cm_4_scaffold_6423_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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4487..4768
DNA (282bp) protein (94aa)
Gas vesicle structural protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=GVPA_KORVE
Gas vesicle structural protein
Gas vesicle structural protein {ECO:0000256|HAMAP-Rule:MF_00576, ECO:0000256|RuleBase:RU000632}; Short=GVP {ECO:0000256|HAMAP-Rule:MF_00576};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" sourc
13_1_40cm_4_scaffold_6423_12
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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4786..6888
DNA (2103bp) protein (701aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacte
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INZ6_KORVE
PAS/PAC sensor signal transduction histidine kinase
13_1_40cm_4_scaffold_6423_13
RBG_13_Deltaproteobacteria_52_11b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6872..8146
DNA (1275bp) protein (425aa)
signal transduction histidine kinase Tax=RBG_13_Deltaproteobacteria_52_11b_curated
Uncharacterized protein id=2284030 bin=GWB2_Nitrospirae_rel_47_37 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
histidine kinase
13_1_40cm_4_scaffold_6423_trna_1
unknown

Not on your lists

comp(8157..8231)
DNA (75bp)
transferRNA
13_1_40cm_4_scaffold_6423_14
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

8249..8905
DNA (657bp) protein (219aa)
uracil-DNA glycosylase; K03648 uracil-DNA glycosylase [EC:3.2.2.27] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Uracil-DNA glycosylase superfamily n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6THF3_9CHLR
uracil-DNA glycosylase
13_1_40cm_4_scaffold_6423_15
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

9085..9993
DNA (909bp) protein (303aa)
Allergen V5/Tpx-1 family protein n=1 Tax=Burkholderia sp. SJ98 RepID=K8RP90_9BURK
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_4_scaffold_6423_16
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

10013..10597
DNA (585bp) protein (195aa)
glucose sorbosone dehydrogenase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Subtilisin-like serine proteases (Peptidase S8 family) id=4041157 bin=GWC2_TM7_44_17 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
13_1_40cm_4_scaffold_6423_17
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

11017..11334
DNA (318bp) protein (106aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=mine drainage metagenome RepID=E6PDE6_9ZZZZ
alkyl hydroperoxide reductase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
putative alkyl hydroperoxide reductase
13_1_40cm_4_scaffold_6423_18
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(11331..11777)
DNA (447bp) protein (149aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_4_scaffold_6423_19
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

11801..12517
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037D498B
HAD family hydrolase; K07025 putative hydrolase of the HAD superfamily Tax=RBG_16_Chloroflexi_68_14_curated
HAD family hydrolase
13_1_40cm_4_scaffold_6423_20
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

12724..13308
DNA (585bp) protein (195aa)
carbonic anhydrase; K01673 carbonic anhydrase [EC:4.2.1.1] Tax=RBG_16_Euryarchaeota_68_13_curated
carbonic anhydrase; K01673 carbonic anhydrase [EC:4.2.1.1] id=14424554 bin=bin1_lowGC species=Mycobacterium hassiacum genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin1_lowGC organism_group=Unknown_CP
carbonic anhydrase
13_1_40cm_4_scaffold_6423_21
unknown

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comp(13247..13468)
DNA (222bp) protein (74aa)

This feature has no annotations

13_1_40cm_4_scaffold_6423_22
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

14324..14905
DNA (582bp) protein (194aa)
protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77); K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
protein-L-isoaspartate O-methyltransferase n=1 Tax=Thermodesulfatator atlanticus RepID=UPI0003B350CD
protein-L-isoaspartate O-methyltransferase
13_1_40cm_4_scaffold_6423_23
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

14902..15039
DNA (138bp) protein (46aa)
amidohydrolase 3; K07047 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Displaying 24 items

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