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13_1_40cm_4_scaffold_8490

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_8490_1
unknown

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comp(3..134)
DNA (132bp) protein (44aa)

This feature has no annotations

13_1_40cm_4_scaffold_8490_2
Rothia dentocariosa, Rothia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(159..3356)
DNA (3198bp) protein (1066aa)
Dynamin family protein n=1 Tax=Rothia aeria F0474 RepID=I0UU93_9MICC
ATP-binding protein {ECO:0000313|EMBL:KGJ00763.1}; TaxID=2047 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Rothia.;" source="Rothia dentocariosa.;"
hypothetical protein
13_1_40cm_4_scaffold_8490_3
Frankia sp. CpI1-S, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(3393..3662)
DNA (270bp) protein (90aa)
Putative membrane protein n=1 Tax=Frankia sp. QA3 RepID=I9KDL5_9ACTO
Putative membrane protein {ECO:0000313|EMBL:KJE25253.1}; TaxID=1502723 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;"
transglycosylase associated protein
13_1_40cm_4_scaffold_8490_4
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(3871..5322)
DNA (1452bp) protein (484aa)
Penicillin-binding protein n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N2S6_ANATU
1A family penicillin-binding protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
penicillin-binding protein
13_1_40cm_4_scaffold_8490_5
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6511..7704)
DNA (1194bp) protein (398aa)
spoU3; RNA methyltransferase, TrmH family group 3 (EC:2.1.1.-)
RNA methyltransferase, TrmH family group 3 {ECO:0000313|EMBL:AFS79286.1}; EC=2.1.1.- {ECO:0000313|EMBL:AFS79286.1};; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalki
RNA methyltransferase, TrmH family group 3 n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B3Y9_CLOA9
13_1_40cm_4_scaffold_8490_6
Candidatus Acetothermus autotrophicum, Candidatus Acetothermum, Acetothermia, Bacteria

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comp(7717..9126)
DNA (1410bp) protein (470aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:00
Cysteine--tRNA ligase n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SEV4_9BACT
cysteinyl-tRNA synthetase
13_1_40cm_4_scaffold_8490_7
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9142..9381)
DNA (240bp) protein (80aa)
ispF; 2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase; K01770 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] Tax=RBG_13_Deltaproteobacteria_61_14_curated
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=ISPF_MOOTA
13_1_40cm_4_scaffold_8490_8
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9583..10242)
DNA (660bp) protein (220aa)
Bifunctional enzyme IspD/IspF n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JDH2_ANAD2
2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase
Bifunctional enzyme IspD/IspF {ECO:0000256|HAMAP-Rule:MF_01520, ECO:0000256|SAAS:SAAS00096235}; TaxID=455488 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Ana
13_1_40cm_4_scaffold_8490_9
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

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comp(10246..11247)
DNA (1002bp) protein (334aa)
hypothetical protein Tax=RBG_16_RIF_CHLX_72_14_curated
hypothetical protein
hypothetical protein id=14630134 bin=bin8_Chloro species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
13_1_40cm_4_scaffold_8490_10
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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comp(11414..12568)
DNA (1155bp) protein (385aa)
DNA repair protein RadA (EC:2.1.1.63)
DNA repair protein radA n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C7V2_SPHTD
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" sou
13_1_40cm_4_scaffold_8490_11
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

comp(12715..15207)
DNA (2493bp) protein (831aa)
ClpC ATPase; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC id=14630136 bin=bin8_Chloro species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
ClpC ATPase; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC Tax=CSP1_4_Chloroflexi
ClpC ATPase
13_1_40cm_4_scaffold_8490_12
unknown

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comp(15424..16929)
DNA (1506bp) protein (502aa)

This feature has no annotations

13_1_40cm_4_scaffold_8490_13
RBG_13_Chloroflexi_54_9_curated, Chloroflexi, Bacteria

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17182..17370
DNA (189bp) protein (63aa)
LuxR family transcriptional regulator n=1 Tax=Actinoalloteichus spitiensis RepID=UPI00035FACAD
LuxR family transcriptional regulator Tax=RBG_13_Chloroflexi_54_9_curated
DNA-binding response regulator
13_1_40cm_4_scaffold_8490_14
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

17648..18184
DNA (537bp) protein (179aa)
RNA polymerase sigma factor n=1 Tax=Patulibacter medicamentivorans RepID=H0E3H0_9ACTN
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibac
whiG; RNA polymerase sigma factor whiG
13_1_40cm_4_scaffold_8490_15
unknown

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comp(18144..18554)
DNA (411bp) protein (137aa)

This feature has no annotations

13_1_40cm_4_scaffold_8490_16
unknown

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18851..18931
DNA (81bp) protein (27aa)

This feature has no annotations

Displaying 16 items

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