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13_1_40cm_4_scaffold_1267

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1267_1
R_Acidobacteria_67_21, Acidobacteria, Bacteria

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comp(371..958)
DNA (588bp) protein (196aa)
3-methyladenine DNA glycosylase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DKI5_SINAD
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
3-methyladenine DNA glycosylase
13_1_40cm_4_scaffold_1267_2
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(1044..1382)
DNA (339bp) protein (113aa)
LPBCA THIOREDOXIN n=1 Tax=synthetic construct RepID=UPI0002638C92
thioredoxin; K03671 thioredoxin 1 Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
trxA; thioredoxin
13_1_40cm_4_scaffold_1267_3
R_Acidobacteria_59_13, Acidobacteria, Bacteria

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comp(1440..3038)
DNA (1599bp) protein (533aa)
glgA; glycogen synthase; K00703 starch synthase [EC:2.4.1.21] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
Glycogen synthase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=GLGA_KORVE
glgA; glycogen synthase
13_1_40cm_4_scaffold_1267_4
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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3231..4544
DNA (1314bp) protein (438aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000363CA54
response regulator receiver modulated serine phosphatase
Response regulator receiver modulated serine phosphatase {ECO:0000313|EMBL:ABJ86303.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibac
13_1_40cm_4_scaffold_1267_5
unknown

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4821..5018
DNA (198bp) protein (66aa)

This feature has no annotations

13_1_40cm_4_scaffold_1267_6
unknown

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comp(5154..5396)
DNA (243bp) protein (81aa)

This feature has no annotations

13_1_40cm_4_scaffold_1267_7
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists


5676..6632
DNA (957bp) protein (319aa)
dimethyladenosine transferase (EC:2.1.1.-) Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
16S rRNA methyltransferase n=1 Tax=Xanthomonas sp. SHU199 RepID=UPI0003818AE3
ribosomal RNA small subunit methyltransferase A
13_1_40cm_4_scaffold_1267_8
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

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comp(6742..7473)
DNA (732bp) protein (244aa)
glycerophosphoryl diester phosphodiesterase family protein; K01126 glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
hypothetical protein n=1 Tax=Paenibacillus sp. HW567 RepID=UPI0003821355
hypothetical protein
13_1_40cm_4_scaffold_1267_9
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(8289..9077)
DNA (789bp) protein (263aa)
IclR family transcriptional regulator n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SCF9_9BACT
IclR family transcriptional regulator; K13641 IclR family transcriptional regulator, acetate operon repressor Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
IclR family transcriptional regulator
13_1_40cm_4_scaffold_1267_10
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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9436..11046
DNA (1611bp) protein (537aa)
Malate synthase {ECO:0000313|EMBL:ABF43707.1}; EC=2.3.3.9 {ECO:0000313|EMBL:ABF43707.1};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" s
Malate synthase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHE3_KORVE
malate synthase
13_1_40cm_4_scaffold_1267_11
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

11150..12502
DNA (1353bp) protein (451aa)
isocitrate lyase (EC:4.1.3.1)
Isocitrate lyase {ECO:0000313|EMBL:ABJ86648.1}; EC=4.1.3.1 {ECO:0000313|EMBL:ABJ86648.1};; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Soli
Isocitrate lyase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01UM2_SOLUE
13_1_40cm_4_scaffold_1267_12
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(12533..13189)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NZY8_GRAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEU35704.1}; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (strain ATCC B
13_1_40cm_4_scaffold_1267_13
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(13325..14554)
DNA (1230bp) protein (410aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00037B8A2B
class I/II aminotransferase
Aminotransferase class I and II {ECO:0000313|EMBL:ADV81305.1}; Flags: Precursor;; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus
13_1_40cm_4_scaffold_1267_14
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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14783..15526
DNA (744bp) protein (248aa)
hypothetical protein; K09990 hypothetical protein id=14626945 bin=bin7_NC10_sister species=Paenibacillus mucilaginosus genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
hypothetical protein; K09990 hypothetical protein Tax=CSP1_6_Rokubacteria
hypothetical protein
13_1_40cm_4_scaffold_1267_15
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(15605..16999)
DNA (1395bp) protein (465aa)
NAD(P) transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; EC=1.6.1.2 {ECO:0000256|PIRNR:PIRNR000204};; Nicotinamide nucleotide transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}
NAD(P) transhydrogenase subunit beta n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIW5_KORVE
NAD(P) transhydrogenase subunit beta
13_1_40cm_4_scaffold_1267_16

Not on your lists

comp(16996..17301)
DNA (306bp) protein (102aa)
Nicotinamide nucleotide transhydrogenase, subunit alpha n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIW4_KORVE
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48807.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
nicotinamide nucleotide transhydrogenase subunit alpha
13_1_40cm_4_scaffold_1267_17

Not on your lists

comp(17298..18488)
DNA (1191bp) protein (397aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000361CBC2
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48806.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
NAD(P)(+) transhydrogenase
13_1_40cm_4_scaffold_1267_18

Not on your lists

18809..19651
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QIP6_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI07112.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
Displaying 18 items

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