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13_1_40cm_4_scaffold_3375

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_3375_1
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

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comp(25..693)
DNA (669bp) protein (223aa)
Molybdate ABC transporter, permease protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHV6_9BACT
modB; molybdate ABC transporter permease protein; K02018 molybdate transport system permease protein Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
modB; molybdate ABC transporter permease protein
13_1_40cm_4_scaffold_3375_2
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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comp(738..1565)
DNA (828bp) protein (276aa)
Molybdate ABC transporter, periplasmic binding protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHV9_9BACT
modA; molybdate ABC transporter periplasmic binding protein; K02020 molybdate transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
modA; molybdate ABC transporter periplasmic binding protein
13_1_40cm_4_scaffold_3375_3
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(1573..1980)
DNA (408bp) protein (136aa)
Molybdenum-pterin binding protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRF0_KORVE
molybdenum-pterin-binding protein
Molybdenum-pterin binding protein {ECO:0000313|EMBL:ABF40550.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versati
13_1_40cm_4_scaffold_3375_4
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

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comp(2065..4488)
DNA (2424bp) protein (808aa)
3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SH84_9BACT
3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase {ECO:0000313|EMBL:BAL55520.1}; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
3-hydroxyacyl-CoA dehydrogenase
13_1_40cm_4_scaffold_3375_5
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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4592..5506
DNA (915bp) protein (305aa)
Patatin n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INT2_KORVE
patatin
Patatin {ECO:0000313|EMBL:ABF41468.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
13_1_40cm_4_scaffold_3375_6
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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comp(5552..5812)
DNA (261bp) protein (87aa)
Putative uncharacterized protein n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F3T0_ACIC5
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein
13_1_40cm_4_scaffold_3375_7
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

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comp(5883..6737)
DNA (855bp) protein (285aa)
hypothetical protein; K00507 stearoyl-CoA desaturase (delta-9 desaturase) [EC:1.14.19.1] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
Delta-9 acyl-phospholipid desaturase (EC:1.14.19.-)
Uncharacterized protein n=1 Tax=Brassica rapa subsp. pekinensis RepID=M4DG49_BRARP
13_1_40cm_4_scaffold_3375_8
unknown

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7214..7429
DNA (216bp) protein (72aa)

This feature has no annotations

13_1_40cm_4_scaffold_3375_9
Desulfovibrio piezophilus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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7445..8572
DNA (1128bp) protein (376aa)
pleD; pleD gene product; K02488 two-component system, cell cycle response regulator id=12554452 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S)
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:CCH49184.1}; TaxID=1322246 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionacea
13_1_40cm_4_scaffold_3375_10
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

8999..9721
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036283F3
cyclic nucleotide-binding domain-containing protein Tax=RBG_16_Acidobacteria_68_9_curated
cyclic nucleotide-binding domain-containing protein
13_1_40cm_4_scaffold_3375_11
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(9830..10579)
DNA (750bp) protein (250aa)
tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02AK8_SOLUE
tRNA/rRNA methyltransferase SpoU
tRNA/rRNA methyltransferase (SpoU) {ECO:0000313|EMBL:ABJ81908.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibac
13_1_40cm_4_scaffold_3375_12
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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11007..11927
DNA (921bp) protein (307aa)
pckA1; phosphoenolpyruvate carboxykinase (EC:4.1.1.32)
Phosphoenolpyruvate carboxykinase [GTP] n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GFK1_SORC5
Phosphoenolpyruvate carboxykinase [GTP] {ECO:0000256|HAMAP-Rule:MF_00452, ECO:0000256|SAAS:SAAS00222031}; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00452};; Short=PEPCK {ECO:0000256|HAMAP-Rul
Displaying 12 items

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