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13_1_40cm_4_scaffold_3858

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_3858_1
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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2..484
DNA (483bp) protein (161aa)
ferredoxin oxidoreductase n=1 Tax=Calescamantes bacterium JGI 0000106-G12 RepID=UPI0003B61721
oxidoreductase FAD/NAD(P)-binding domain-containing protein
Oxidoreductase FAD/NAD(P)-binding domain protein {ECO:0000313|EMBL:ACY48174.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;"
13_1_40cm_4_scaffold_3858_2
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(502..1089)
DNA (588bp) protein (196aa)
TetR family transcriptional regulator n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MN94_CORCM
TetR family transcriptional regulator
TetR family transcriptional regulator {ECO:0000313|EMBL:AFE05327.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.
13_1_40cm_4_scaffold_3858_3
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

1299..2345
DNA (1047bp) protein (349aa)
ketol-acid reductoisomerase; K00053 ketol-acid reductoisomerase [EC:1.1.1.86] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
ketol-acid reductoisomerase (EC:1.1.1.86)
Ketol-acid reductoisomerase n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=ILVC_MOOTA
13_1_40cm_4_scaffold_3858_4
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

2338..4032
DNA (1695bp) protein (565aa)
acetolactate synthase large subunit; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
Acetolactate synthase n=1 Tax=Enterobacter aerogenes EA1509E RepID=L8BK79_ENTAE
acetolactate synthase 2 catalytic subunit
13_1_40cm_4_scaffold_3858_5
unknown

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4130..4453
DNA (324bp) protein (108aa)

This feature has no annotations

13_1_40cm_4_scaffold_3858_6
R_Nitrospirae_66_17, Nitrospirae, Bacteria

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4540..6282
DNA (1743bp) protein (581aa)
dihydroxyacid dehydratase (EC:4.2.1.9); K01687 dihydroxy-acid dehydratase [EC:4.2.1.9] Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QTF5_9DELT
13_1_40cm_4_scaffold_3858_7
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(6241..6627)
DNA (387bp) protein (129aa)
Deiodinase, iodothyronine, type I n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IR24_KORVE
deiodinase, iodothyronine, type I
Deiodinase, iodothyronine, type I {ECO:0000313|EMBL:ABF40676.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versati
13_1_40cm_4_scaffold_3858_8
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(6688..7011)
DNA (324bp) protein (108aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IR23_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF40677.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strai
13_1_40cm_4_scaffold_3858_9
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(7115..7579)
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000377C0C3
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein
13_1_40cm_4_scaffold_3858_10
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(7720..8073)
DNA (354bp) protein (118aa)
frdD; Fumarate reductase subunit D (EC:1.3.99.1) Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
hypothetical protein n=1 Tax=Kribbella catacumbae RepID=UPI0003810A01
frdD; fumarate reductase subunit D
13_1_40cm_4_scaffold_3858_11
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(8090..8518)
DNA (429bp) protein (143aa)
Fumarate reductase subunit C n=1 Tax=Rhodococcus imtechensis RKJ300 = JCM 13270 PF0_9NOCA">RepID=I0WPF0_9NOCA
frdC; fumarate reductase subunit C; K00246 fumarate reductase subunit C Tax=RBG_16_Acidobacteria_70_10_curated
fumarate reductase FrdC
13_1_40cm_4_scaffold_3858_12
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(8515..9282)
DNA (768bp) protein (256aa)
frdB; Fumarate reductase (anaerobic), Fe-S subunit (EC:1.3.99.1) Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
frdB; Fumarate reductase (anaerobic), Fe-S subunit (EC:1.3.99.1) id=14631498 bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin9_gal15 organism_group=GAL15
frdB; Fumarate reductase (anaerobic), Fe-S subunit (EC:1.3.99.1)
13_1_40cm_4_scaffold_3858_13
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(10353..11042)
DNA (690bp) protein (230aa)
frdA; Putative fumarate reductase [flavoprotein subunit] FrdA (fumarate dehydrogenase) (fumaric hydrogenase) (EC:1.3.99.1) Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
fumarate reductase flavoprotein subunit n=1 Tax=Kribbella catacumbae RepID=UPI00035C6254
frdA; fumarate reductase flavoprotein subunit frdA
13_1_40cm_4_scaffold_3858_14
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11318..12277
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UCD1_MYXSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGC44119.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxoco
13_1_40cm_4_scaffold_3858_15
unknown

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12926..13210
DNA (285bp) protein (95aa)

This feature has no annotations

13_1_40cm_4_scaffold_3858_16
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

13207..14094
DNA (888bp) protein (296aa)
Ribonuclease BN, putative n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQL8_KORVE
ribonuclease BN
Ribonuclease BN, putative {ECO:0000313|EMBL:ABF40832.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (str
13_1_40cm_4_scaffold_3858_17
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

14463..17390
DNA (2928bp) protein (976aa)
Surface antigen (D15) n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IMU5_KORVE
surface antigen (D15)
Surface antigen (D15) {ECO:0000313|EMBL:ABF41805.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter
13_1_40cm_4_scaffold_3858_18
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

17387..18031
DNA (645bp) protein (215aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IMU4_KORVE
hypothetical protein; K09800 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
hypothetical protein
13_1_40cm_4_scaffold_3858_19
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

17985..21350
DNA (3366bp) protein (1122aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IMU4_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF41806.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacte
13_1_40cm_4_scaffold_3858_20
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

comp(21400..21822)
DNA (423bp) protein (141aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IMU4_KORVE
hypothetical protein; K09800 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
hypothetical protein
Displaying 20 items

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