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13_1_40cm_4_scaffold_4620

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Displaying 23 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_4620_1
Asticcacaulis biprosthecium, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..256)
DNA (255bp) protein (85aa)
Putative uncharacterized protein n=1 Tax=Asticcacaulis biprosthecum C19 RepID=F4QIV0_9CAUL
Putative uncharacterized protein {ECO:0000313|EMBL:EGF93013.1}; TaxID=715226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticca
hypothetical protein
13_1_40cm_4_scaffold_4620_2
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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444..830
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035E6E48
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF42599.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strai
13_1_40cm_4_scaffold_4620_3
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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884..1948
DNA (1065bp) protein (355aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00037CBCC0
Uncharacterized protein {ECO:0000313|EMBL:EKS28925.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
NHL repeat containing protein
13_1_40cm_4_scaffold_4620_4
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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2096..2839
DNA (744bp) protein (248aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01VX1_SOLUE
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
hypothetical protein
13_1_40cm_4_scaffold_4620_5
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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3101..4762
DNA (1662bp) protein (554aa)
Putative GAF sensor protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRK4_KORVE
GAF sensor protein
Putative GAF sensor protein {ECO:0000313|EMBL:ABF40496.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (s
13_1_40cm_4_scaffold_4620_6
R_Acidobacteria_61_28, Acidobacteria, Bacteria

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4878..6452
DNA (1575bp) protein (525aa)
pruA; 1-pyrroline-5-carboxylate dehydrogenase (EC:1.5.1.12); K00294 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.1.12] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
delta-1-pyrroline-5-carboxylate dehydrogenase (EC:1.5.1.12)
Putative delta-1-pyrroline-5-carboxylate dehydrogenase id=2466610 bin=GWC2_Ignavibacteria_56_12 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
13_1_40cm_4_scaffold_4620_7
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(6545..7861)
DNA (1317bp) protein (439aa)
Amino acid transporter n=1 Tax=Cyanobium gracile (strain ATCC 27147 / PCC 6307) RepID=K9P8W1_CYAGP
amino acid permease-associated protein; K03294 basic amino acid/polyamine antiporter, APA family Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
amino acid transporter
13_1_40cm_4_scaffold_4620_8
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(8045..8728)
DNA (684bp) protein (228aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DFV6_SINAD
methylase
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:AGA28142.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisph
13_1_40cm_4_scaffold_4620_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

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8899..10122
DNA (1224bp) protein (408aa)
Glycosyl transferase family 2 n=1 Tax=Oscillatoria nigro-viridis PCC 7112 RepID=K9VP39_9CYAN
glycosyl transferase family protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
glycosyl transferase family 2
13_1_40cm_4_scaffold_4620_10
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(10177..10935)
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037BC62D
Uncharacterized protein {ECO:0000313|EMBL:EDL58228.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
hypothetical protein
13_1_40cm_4_scaffold_4620_11
unknown

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11620..11925
DNA (306bp) protein (102aa)

This feature has no annotations

13_1_40cm_4_scaffold_4620_12
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(11974..13095)
DNA (1122bp) protein (374aa)
Twitching motility protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ITV6_KORVE
twitching motility protein; K02669 twitching motility protein PilT Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
twitching motility protein
13_1_40cm_4_scaffold_4620_13

Not on your lists

comp(13441..14556)
DNA (1116bp) protein (372aa)
Serine-type carboxypeptidase family protein (Fragment) n=2 Tax=mine drainage metagenome RepID=T1BW54_9ZZZZ
Serine-type carboxypeptidase family protein {ECO:0000313|EMBL:EQD58100.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage
carboxypeptidase C
13_1_40cm_4_scaffold_4620_14

Not on your lists

comp(14549..14962)
DNA (414bp) protein (138aa)
Peptidase S10 serine carboxypeptidase {ECO:0000313|EMBL:EQD30288.1}; EC=3.4.16.- {ECO:0000313|EMBL:EQD30288.1};; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological
Peptidase S10 serine carboxypeptidase (Fragment) n=1 Tax=mine drainage metagenome RepID=T0YAY8_9ZZZZ
peptidase S10 serine carboxypeptidase
13_1_40cm_4_scaffold_4620_15
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(15039..15869)
DNA (831bp) protein (277aa)
HAD-superfamily hydrolase subfamily IA, variant 3 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJM1_KORVE
HAD family hydrolase
HAD-superfamily hydrolase subfamily IA, variant 3 {ECO:0000313|EMBL:ABF42929.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Korib
13_1_40cm_4_scaffold_4620_trna_1
unknown

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comp(15794..15866)
DNA (73bp)
transferRNA
13_1_40cm_4_scaffold_4620_16
unknown

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comp(15971..16477)
DNA (507bp) protein (169aa)

This feature has no annotations

13_1_40cm_4_scaffold_4620_17
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

16734..17741
DNA (1008bp) protein (336aa)
Putative signal transduction histidine kinase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IT24_KORVE
signal transduction histidine kinase Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
signal transduction histidine kinase
13_1_40cm_4_scaffold_4620_18
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

17743..18408
DNA (666bp) protein (222aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q027R2_SOLUE
LuxR family transcriptional regulator Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
LuxR family transcriptional regulator
13_1_40cm_4_scaffold_4620_19
unknown

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18581..19123
DNA (543bp) protein (181aa)

This feature has no annotations

13_1_40cm_4_scaffold_4620_20
unknown

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comp(19153..19740)
DNA (588bp) protein (196aa)

This feature has no annotations

13_1_40cm_4_scaffold_4620_21
unknown

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comp(19750..20454)
DNA (705bp) protein (235aa)

This feature has no annotations

13_1_40cm_4_scaffold_4620_22
unknown

Not on your lists

21959..22246
DNA (288bp) protein (96aa)

This feature has no annotations

Displaying 23 items

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