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13_1_40cm_4_scaffold_2249

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Displaying 23 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_2249_1
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..279
DNA (279bp) protein (93aa)
acT domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
ACT domain-containing protein id=4139003 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
acT domain-containing protein
13_1_40cm_4_scaffold_2249_2
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

478..1161
DNA (684bp) protein (228aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7PXQ6_CATAD
Crp/Fnr family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
Crp/Fnr family transcriptional regulator
13_1_40cm_4_scaffold_2249_3
unknown

Not on your lists

1272..1448
DNA (177bp) protein (59aa)

This feature has no annotations

13_1_40cm_4_scaffold_2249_4
unknown

Not on your lists

1508..1729
DNA (222bp) protein (74aa)

This feature has no annotations

13_1_40cm_4_scaffold_2249_5
unknown

Not on your lists

1701..2174
DNA (474bp) protein (158aa)

This feature has no annotations

13_1_40cm_4_scaffold_2249_6
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2391..3494
DNA (1104bp) protein (368aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00036CDF58
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAO28304.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogen
13_1_40cm_4_scaffold_2249_7
unknown

Not on your lists

3811..4167
DNA (357bp) protein (119aa)

This feature has no annotations

13_1_40cm_4_scaffold_2249_8
unknown

Not on your lists

4207..4410
DNA (204bp) protein (68aa)

This feature has no annotations

13_1_40cm_4_scaffold_2249_9
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(4480..5331)
DNA (852bp) protein (284aa)
hypothetical protein n=1 Tax=Burkholderia bryophila RepID=UPI0003788779
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
13_1_40cm_4_scaffold_2249_10
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(5417..5854)
DNA (438bp) protein (146aa)
amino acid-binding ACT Tax=RBG_16_Acidobacteria_70_10_curated
Amino acid-binding ACT id=2157270 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
amino acid-binding ACT
13_1_40cm_4_scaffold_2249_11
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6378..6662
DNA (285bp) protein (95aa)
GYD family protein n=1 Tax=Streptomyces pristinaespiralis ATCC 25486 RepID=B5H974_STRPR
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
hypothetical protein
13_1_40cm_4_scaffold_2249_12
unknown

Not on your lists

comp(6811..7032)
DNA (222bp) protein (74aa)

This feature has no annotations

13_1_40cm_4_scaffold_2249_13
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7010..7318)
DNA (309bp) protein (103aa)
ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Ferredoxin id=2101200 bin=GWD2_Deltaproteobacteria_55_8 species=Methylacidiphilum fumariolicum genus=Methylacidiphilum taxon_order=Methylacidiphilales taxon_class=unknown phylum=Verrucomicrobia tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase
13_1_40cm_4_scaffold_2249_14
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7898..9664
DNA (1767bp) protein (589aa)
ABC-type Fe3+ transport system permease component; K02011 iron(III) transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
ABC-type Fe3+ transport system permease component id=2117334 bin=GWD2_Deltaproteobacteria_55_8 species=Agrobacterium tumefaciens genus=Agrobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
ABC-type Fe3+ transport system permease component
13_1_40cm_4_scaffold_2249_15
Pelosinus fermentans, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

9893..10291
DNA (399bp) protein (133aa)
ATP/cobalamin adenosyltransferase n=6 Tax=Pelosinus RepID=I8RH23_9FIRM
Uncharacterized 15.0 kDa protein in dhaT-dhaS intergenic region
ATP/cobalamin adenosyltransferase {ECO:0000313|EMBL:EIW18983.1}; TaxID=1149862 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus fermentans
13_1_40cm_4_scaffold_2249_16
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

10473..11789
DNA (1317bp) protein (439aa)
Putative reductive dehalogenase subunit A (Fragment) n=1 Tax=uncultured bacterium RepID=U5S1W8_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
rdhA; putative reductive dehalogenase subunit A
13_1_40cm_4_scaffold_2249_17
unknown

Not on your lists

11789..12364
DNA (576bp) protein (192aa)

This feature has no annotations

13_1_40cm_4_scaffold_2249_18
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

12451..13113
DNA (663bp) protein (221aa)
Putative ferredoxin n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I3M1_CALAS
putative ferredoxin
Putative ferredoxin {ECO:0000313|EMBL:BAL99858.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535
13_1_40cm_4_scaffold_2249_19
BJP_IG2069_Syntrophobacterales_47_18, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13267..13620
DNA (354bp) protein (118aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9RZU7_THEOJ
two component transcriptional regulator, winged helix family
Tax=BJP_IG2069_Syntrophobacterales_47_18
13_1_40cm_4_scaffold_2249_20
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13758..14054)
DNA (297bp) protein (99aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
13_1_40cm_4_scaffold_2249_21
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14067..15596)
DNA (1530bp) protein (510aa)
Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II (EC:6.2.1.3) Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
O-succinylbenzoate--CoA ligase id=2065198 bin=GWD2_Deltaproteobacteria_55_8 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
AMP-dependent synthetase and ligase
13_1_40cm_4_scaffold_2249_22
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15572..16534)
DNA (963bp) protein (321aa)
class II aldolase/adducin family protein; K01628 L-fuculose-phosphate aldolase [EC:4.1.2.17] Tax=GWD2_Deltaproteobacteria_55_8_curated
Class II aldolase/adducin family protein id=2065201 bin=GWD2_Deltaproteobacteria_55_8 species=Marinithermus hydrothermalis genus=Marinithermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
class II aldolase/adducin family protein
13_1_40cm_4_scaffold_2249_23
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16549..17712)
DNA (1164bp) protein (388aa)
aIF-2BI family translation initiation factor (EC:5.3.1.23); K08963 methylthioribose-1-phosphate isomerase [EC:5.3.1.23] Tax=GWD2_Deltaproteobacteria_55_8_curated
methylthioribose-1-phosphate isomerase (EC:5.3.1.23)
Methylthioribose-1-phosphate isomerase id=2065235 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Desulforudis audaxviator genus=Candidatus Desulforudis taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Displaying 23 items

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