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13_1_40cm_4_scaffold_6245

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Displaying 15 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_6245_1
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

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2..277
DNA (276bp) protein (92aa)
coaD; phosphopantetheine adenylyltransferase (EC:2.7.7.3); K00954 pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
coaD; phosphopantetheine adenylyltransferase (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UHA4_MYXSD
13_1_40cm_4_scaffold_6245_2
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

289..1485
DNA (1197bp) protein (399aa)
class I and II aminotransferase; K00812 aspartate aminotransferase [EC:2.6.1.1] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
L-aspartate aminotransferase apoenzyme n=1 Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1AR27_PELPD
aspartate aminotransferase
13_1_40cm_4_scaffold_6245_3
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1512..1934)
DNA (423bp) protein (141aa)
NUDIX hydrolase; K03574 7,8-dihydro-8-oxoguanine triphosphatase [EC:3.6.1.-] id=16786514 bin=RBG_16_Aminicenantes_63_16_plus species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
NUDIX family hydrolase Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
NUDIX hydrolase
13_1_40cm_4_scaffold_6245_trna_1
unknown

Not on your lists

1998..2071
DNA (74bp)
transferRNA
13_1_40cm_4_scaffold_6245_4
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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2319..2948
DNA (630bp) protein (210aa)
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
13_1_40cm_4_scaffold_6245_5
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3204..3701)
DNA (498bp) protein (166aa)
Hypothetical cytosolic protein n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LWS1_SYNAS
hypothetical protein; K06962 Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
cytoplasmic protein
13_1_40cm_4_scaffold_6245_6
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3821..4993
DNA (1173bp) protein (391aa)
yfdZ; aminotransferase (EC:2.6.1.-); K10206 LL-diaminopimelate aminotransferase [EC:2.6.1.83] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
yfdZ; aminotransferase (EC:2.6.1.-)
LL-diaminopimelate aminotransferase id=1837245 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
13_1_40cm_4_scaffold_6245_7
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5017..5520
DNA (504bp) protein (168aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC:2.7.6.3); K00950 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] Tax=RIFCSPLOWO2_12_FULL_Deltapro
7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase id=1837246 bin=GWD2_Deltaproteobacteria_55_8 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase
13_1_40cm_4_scaffold_6245_8
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5788..6717)
DNA (930bp) protein (310aa)
mpl; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (EC:6.3.2.-)
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1DB17_MYXXD
mpl; hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
13_1_40cm_4_scaffold_6245_9
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7166..8272)
DNA (1107bp) protein (369aa)
putative esterase, beta-lactamase family Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
Beta-lactamase id=2005024 bin=GWD2_Deltaproteobacteria_55_8 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
putative esterase, beta-lactamase family
13_1_40cm_4_scaffold_6245_10
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8393..9304)
DNA (912bp) protein (304aa)
peptidase U61 LD-carboxypeptidase A; K01297 muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
Muramoyltetrapeptide carboxypeptidase id=2005027 bin=GWD2_Deltaproteobacteria_55_8 species=ACD73 genus=ACD73 taxon_order=ACD73 taxon_class=ACD73 phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
peptidase U61 LD-carboxypeptidase A
13_1_40cm_4_scaffold_6245_11
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9598..9873
DNA (276bp) protein (92aa)
id=2005029 Tax=GWD2_Deltaproteobacteria_55_8_curated
id=2005029 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
13_1_40cm_4_scaffold_6245_12
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9870..10145
DNA (276bp) protein (92aa)
Uncharacterized protein-like protein id=2005030 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
hypothetical protein
13_1_40cm_4_scaffold_6245_13
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10346..10636
DNA (291bp) protein (97aa)
10 kDa chaperonin id=2005034 bin=GWD2_Deltaproteobacteria_55_8 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
groES; co-chaperonin GroES; K04078 chaperonin GroES Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
groES; co-chaperonin GroES
13_1_40cm_4_scaffold_6245_14
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10666..11217
DNA (552bp) protein (184aa)
60 kDa chaperonin 2 id=2005039 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
groEL; molecular chaperone GroEL; K04077 chaperonin GroEL Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
groEL; molecular chaperone GroEL
Displaying 15 items

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