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13_1_40cm_4_scaffold_6351

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Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_6351_1
CG_CPR03_02, CG_CPR03, Bacteria

Not on your lists

comp(20..769)
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00035F7B1C
short-chain dehydrogenase/reductase SDR Tax=CG_CPR03_02
short-chain dehydrogenase/reductase sdr
13_1_40cm_4_scaffold_6351_2
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

876..2129
DNA (1254bp) protein (418aa)
cobalamin synthesis protein P47K Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Cobalamin synthesis protein P47K id=1782161 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Cyanothece taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
putative GTPase, G3E family
13_1_40cm_4_scaffold_6351_3
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2276..2812)
DNA (537bp) protein (179aa)
tRNA delta(2)-isopentenylpyrophosphate transferase; K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
tRNA dimethylallyltransferase id=1782154 bin=GWD2_Deltaproteobacteria_55_8 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
tRNA delta(2)-isopentenylpyrophosphate transferase
13_1_40cm_4_scaffold_6351_4
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2803..3165)
DNA (363bp) protein (121aa)
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase; K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] Tax=GWD2_Deltaproteobacteria_55_8_curated
tRNA dimethylallyltransferase id=1782154 bin=GWD2_Deltaproteobacteria_55_8 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
miaA-1; tRNA delta(2)-isopentenylpyrophosphate transferase
13_1_40cm_4_scaffold_6351_5
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3214..4950)
DNA (1737bp) protein (579aa)
DNA mismatch repair protein MutL id=1782151 bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
mutL; DNA mismatch repair protein; K03572 DNA mismatch repair protein MutL Tax=GWD2_Deltaproteobacteria_55_8_curated
DNA mismatch repair protein MutL
13_1_40cm_4_scaffold_6351_6
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5139..5744
DNA (606bp) protein (202aa)
Uncharacterized protein id=1782148 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein Tax=GWD2_Deltaproteobacteria_55_8_curated
hypothetical protein
13_1_40cm_4_scaffold_6351_7
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5863..7302)
DNA (1440bp) protein (480aa)
ubiD_R; UbiD-like subunit of potential (de) carboxylase Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
UbiD-like subunit of potential (De) carboxylase id=2137912 bin=GWD2_Deltaproteobacteria_55_8 species=Aromatoleum aromaticum genus=Aromatoleum taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
ubiD_R; UbiD-like subunit of potential (de) carboxylase
13_1_40cm_4_scaffold_6351_8
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7360..7932
DNA (573bp) protein (191aa)
rfaE bifunctional protein; K03272 D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curat
Bifunctional protein HldE id=1867808 bin=GWD2_Deltaproteobacteria_55_8 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
rfaE bifunctional protein
13_1_40cm_4_scaffold_6351_9
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7934..8125
DNA (192bp) protein (64aa)
50S ribosomal protein L28 n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NFI0_DESAR
50S ribosomal protein L28; K02902 large subunit ribosomal protein L28 Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
50S ribosomal protein L28
13_1_40cm_4_scaffold_6351_10
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8145..8516)
DNA (372bp) protein (124aa)
(p)ppGpp synthetase I SpoT/RelA (EC:2.7.6.5); K00951 GTP pyrophosphokinase [EC:2.7.6.5] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
(P)ppGpp synthetase I, SpoT/RelA id=1867812 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
GTP pyrophosphokinase
13_1_40cm_4_scaffold_6351_11
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8827..10368)
DNA (1542bp) protein (514aa)
(p)ppGpp synthetase I SpoT/RelA (EC:2.7.6.5); K00951 GTP pyrophosphokinase [EC:2.7.6.5] Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
(p)ppGpp synthetase I SpoT/RelA (EC:2.7.6.5)
(P)ppGpp synthetase I, SpoT/RelA id=1867812 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
13_1_40cm_4_scaffold_6351_12
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10388..11017)
DNA (630bp) protein (210aa)
gmk; guanylate kinase; K00942 guanylate kinase [EC:2.7.4.8] Tax=GWD2_Deltaproteobacteria_55_8_curated
Guanylate kinase id=1867816 bin=GWD2_Deltaproteobacteria_55_8 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
gmk; guanylate kinase
13_1_40cm_4_scaffold_6351_13
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11014..11865)
DNA (852bp) protein (284aa)
YicC-like domain-containing protein id=1867820 bin=GWD2_Deltaproteobacteria_55_8 species=Clostridium cellulovorans genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
YicC-like domain-containing protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
hypothetical protein
13_1_40cm_4_scaffold_6351_14
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11862..12845)
DNA (984bp) protein (328aa)
PfkB domain protein id=1867824 bin=GWD2_Deltaproteobacteria_55_8 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
ribokinase-like domain-containing protein Tax=GWD2_Deltaproteobacteria_55_8_curated
ribokinase-like domain-containing protein
13_1_40cm_4_scaffold_6351_15
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12885..13985)
DNA (1101bp) protein (367aa)
glycosyl transferase group 1 family protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Glycosyl transferase group 1 id=1867828 bin=GWD2_Deltaproteobacteria_55_8 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
glycosyl transferase family protein
13_1_40cm_4_scaffold_6351_16
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13966..14754)
DNA (789bp) protein (263aa)
glycosyl transferase family protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Glycosyltransferase id=1867832 bin=GWD2_Deltaproteobacteria_55_8 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
family 2 glycosyl transferase
13_1_40cm_4_scaffold_6351_17
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15233..15640)
DNA (408bp) protein (136aa)
Glycosyl transferase family 2 id=1867840 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
family 2 glycosyl transferase Tax=GWD2_Deltaproteobacteria_55_8_curated
glycosyltransferase
13_1_40cm_4_scaffold_6351_18
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15597..16100)
DNA (504bp) protein (168aa)
Glycosyl transferase family 2 id=1867840 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
family 2 glycosyl transferase Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
hypothetical protein
13_1_40cm_4_scaffold_6351_19
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16100..16882)
DNA (783bp) protein (261aa)
Glycosyl transferase family 2 id=1867844 bin=GWD2_Deltaproteobacteria_55_8 species=Desulfovibrio desulfuricans genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
family 2 glycosyl transferase Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
family 2 glycosyl transferase
Displaying 19 items

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