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13_1_40cm_4_scaffold_976

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Displaying 28 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_976_1
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists


comp(1..444)
DNA (444bp) protein (148aa)
30S ribosomal protein S4 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=RS4_KORVE
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
30S ribosomal protein S4
13_1_40cm_4_scaffold_976_2
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists


comp(481..927)
DNA (447bp) protein (149aa)
30S ribosomal protein S11 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=RS11_KORVE
30S ribosomal protein S11; K02948 small subunit ribosomal protein S11 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
30S ribosomal protein S11
13_1_40cm_4_scaffold_976_3
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists


comp(988..1377)
DNA (390bp) protein (130aa)
30S ribosomal protein S13 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=RS13_SOLUE
rpsM; 30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
rpsM; 30S ribosomal protein S13
13_1_40cm_4_scaffold_976_4
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(1529..1798)
DNA (270bp) protein (90aa)
Translation initiation factor IF-1 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=IF1_KORVE
infA; translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000255|HAMAP-Rule:MF_00075}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter ve
13_1_40cm_4_scaffold_976_5
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(1814..2173)
DNA (360bp) protein (120aa)
methionine aminopeptidase, type I; K01265 methionyl aminopeptidase [EC:3.4.11.18] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
Methionine aminopeptidase n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YSK2_9FIRM
methionine aminopeptidase
13_1_40cm_4_scaffold_976_6
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(2562..3248)
DNA (687bp) protein (229aa)
adenylate kinase; K00939 adenylate kinase [EC:2.7.4.3] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
adenylate kinase n=1 Tax=Thermodesulfobacterium thermophilum RepID=UPI0003B5A716
adenylate kinase
13_1_40cm_4_scaffold_976_7
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists


comp(3264..4667)
DNA (1404bp) protein (468aa)
Protein translocase subunit SecY n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01WB2_SOLUE
protein translocase subunit SecY/sec61 alpha; K03076 preprotein translocase subunit SecY Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
protein translocase subunit SecY/sec61 alpha
13_1_40cm_4_scaffold_976_8
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists


comp(4677..5180)
DNA (504bp) protein (168aa)
50S ribosomal protein L15 n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SKY2_THEM7
50S ribosomal protein L15; K02876 large subunit ribosomal protein L15 Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
50S ribosomal protein L15
13_1_40cm_4_scaffold_976_9
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists


comp(5191..5400)
DNA (210bp) protein (70aa)
50S ribosomal protein L30 n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6THC6_9CHLR
50S ribosomal protein L30; K02907 large subunit ribosomal protein L30 Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
rpmD; ribosomal protein L30/L7E
13_1_40cm_4_scaffold_976_10
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists


comp(5400..5978)
DNA (579bp) protein (193aa)
30S ribosomal protein S5 n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V7K1_TERSS
30S ribosomal protein S5
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Te
13_1_40cm_4_scaffold_976_11
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists


comp(5982..6362)
DNA (381bp) protein (127aa)
50S ribosomal protein L18 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=RL18_SOLUE
50S ribosomal protein L18; K02881 large subunit ribosomal protein L18 Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
50S ribosomal protein L18
13_1_40cm_4_scaffold_976_12
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists


comp(6375..6920)
DNA (546bp) protein (182aa)
50S ribosomal protein L6 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=RL6_SOLUE
50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
rplF; 50S ribosomal protein L6
13_1_40cm_4_scaffold_976_13
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists


comp(6963..7361)
DNA (399bp) protein (133aa)
30S ribosomal protein S8 n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037E56F9
30S ribosomal protein S8
rpsH; 30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
13_1_40cm_4_scaffold_976_14
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists


comp(7372..7557)
DNA (186bp) protein (62aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003822EB2
SSU ribosomal protein S14P; K02954 small subunit ribosomal protein S14 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
30S ribosomal protein S14
13_1_40cm_4_scaffold_976_15
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists


comp(7580..8122)
DNA (543bp) protein (181aa)
50S ribosomal protein L5 n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=RL5_GEOUR
rplE; 50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
rplE; 50S ribosomal protein L5
13_1_40cm_4_scaffold_976_16
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists


comp(8141..8494)
DNA (354bp) protein (118aa)
50S ribosomal protein L24 n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=RL24_CARHZ
50S ribosomal protein L24; K02895 large subunit ribosomal protein L24 Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
rplX; 50S ribosomal protein L24
13_1_40cm_4_scaffold_976_17
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists


comp(8498..8866)
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=RL14_SOLUE
rplN; 50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
rplN; 50S ribosomal protein L14
13_1_40cm_4_scaffold_976_18
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists


comp(8889..9170)
DNA (282bp) protein (94aa)
30S ribosomal protein S17 n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F633_ACIC5
rpsQ; 30S ribosomal protein S17
30S ribosomal protein S17 {ECO:0000255|HAMAP-Rule:MF_01345}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis
13_1_40cm_4_scaffold_976_19
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists


comp(9167..9481)
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00037DD39D
50S ribosomal protein L29
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis
13_1_40cm_4_scaffold_976_20
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists


comp(9484..9900)
DNA (417bp) protein (139aa)
50S ribosomal protein L16 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=RL16_KORVE
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
rplP; 50S ribosomal protein L16
13_1_40cm_4_scaffold_976_21
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists


comp(9943..10617)
DNA (675bp) protein (225aa)
30S ribosomal protein S3 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=RS3_KORVE
30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
30S ribosomal protein S3
13_1_40cm_4_scaffold_976_22
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists


comp(10683..11195)
DNA (513bp) protein (171aa)
50S ribosomal protein L22 n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B40D10
50S ribosomal protein L22; K02890 large subunit ribosomal protein L22 Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
50S ribosomal protein L22
13_1_40cm_4_scaffold_976_23
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists


comp(11199..11543)
DNA (345bp) protein (115aa)
30S ribosomal protein S19 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=RS19_SOLUE
rpsS; ribosomal protein S19; K02965 small subunit ribosomal protein S19 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
rpsS; 30S ribosomal protein S19
13_1_40cm_4_scaffold_976_24
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists


comp(11934..12755)
DNA (822bp) protein (274aa)
rplB; 50S ribosomal protein L2; K02886 large subunit ribosomal protein L2 Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
50S ribosomal protein L2; K02886 large subunit ribosomal protein L2 id=14625516 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
50S ribosomal protein L2
13_1_40cm_4_scaffold_976_25
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists


comp(12795..13091)
DNA (297bp) protein (99aa)
50S ribosomal protein L23 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=RL23_KORVE
rplW; 50S ribosomal protein L23
50S ribosomal protein L23 {ECO:0000255|HAMAP-Rule:MF_01369}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis
13_1_40cm_4_scaffold_976_26
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists


comp(13095..13880)
DNA (786bp) protein (262aa)
50S ribosomal protein L4 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=RL4_SOLUE
rplD; 50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
rplD; 50S ribosomal protein L4
13_1_40cm_4_scaffold_976_27
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists


comp(13966..14607)
DNA (642bp) protein (214aa)
50S ribosomal protein L3 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=RL3_SOLUE
50S ribosomal protein L3P; K02906 large subunit ribosomal protein L3 Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
50S ribosomal protein L3P
13_1_40cm_4_scaffold_976_28
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists


comp(14655..14783)
DNA (129bp) protein (43aa)
rpsJ; 30S ribosomal protein S10; K02946 small subunit ribosomal protein S10 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
rpsJ; 30S ribosomal protein S10; K02946 small subunit ribosomal protein S10 id=12555580 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
rpsJ; 30S ribosomal protein S10
Displaying 28 items

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