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13_1_40cm_4_scaffold_10563

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Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_10563_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(1..378)
DNA (378bp) protein (126aa)
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10); K00762 orotate phosphoribosyltransferase [EC:2.4.2.10] Tax=GWA2_Rokubacteria_73_35_curated
orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase id=4815545 bin=GWA2_Methylomirabilis_73_35 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_10563_2
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

599..961
DNA (363bp) protein (121aa)
Response regulator receiver protein id=1893308 bin=GWD2_Nitrospirae-related_57_8 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
response regulator receiver protein; K02658 twitching motility two-component system response regulator PilH Tax=GWC2_Nitrospirae_57_13_curated
putative chemotaxis regulator CheY
13_1_40cm_4_scaffold_10563_3
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

951..1505
DNA (555bp) protein (185aa)
hypothetical protein n=1 Tax=alpha proteobacterium L41A RepID=UPI00037D8A53
putative chemotaxis protein CheW Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
CheW protein
13_1_40cm_4_scaffold_10563_4
Thermodesulfovibrio yellowstonii, Thermodesulfovibrio, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

1508..2860
DNA (1353bp) protein (451aa)
Putative uncharacterized protein n=1 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YJP1_THEYD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACI21984.1}; TaxID=289376 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Thermodesulfovibrio.;" source="Thermodesulfovibrio yellowstonii (stra
13_1_40cm_4_scaffold_10563_5
unknown

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comp(2796..3116)
DNA (321bp) protein (107aa)

This feature has no annotations

13_1_40cm_4_scaffold_10563_6
unknown

Not on your lists

comp(3285..3911)
DNA (627bp) protein (209aa)

This feature has no annotations

13_1_40cm_4_scaffold_10563_7
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

4210..4620
DNA (411bp) protein (137aa)
Methyl-accepting chemotaxis protein n=1 Tax=Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416 / KR-200) RepID=K9ZWA1_DEIPD
putative methyl-accepting chemotaxis protein; K02660 twitching motility protein PilJ Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
methyl-accepting chemotaxis protein
13_1_40cm_4_scaffold_10563_8
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

4631..7330
DNA (2700bp) protein (900aa)
putative chemotaxis protein CheA modulated with response regulator receiver region (EC:2.7.13.3); K02487 type IV pili sensor histidine kinase and response regulator; K06596 chemosensory pili system pr
putative chemotaxis protein CheA modulated with response regulator receiver region (EC:2.7.13.3)
Putative Chemotaxis protein CheA modulated with response regulator receiver region (Modular protein) n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PGH3_9BACT
13_1_40cm_4_scaffold_10563_9
Deinococcus peraridilitoris, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

7300..7563
DNA (264bp) protein (88aa)
Chemotaxis protein histidine kinase-like protein n=1 Tax=Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416 / KR-200) RepID=K9ZW38_DEIPD
chemotaxis protein histidine kinase-like protein
Chemotaxis protein histidine kinase-like protein {ECO:0000313|EMBL:AFZ65853.1}; Flags: Precursor;; TaxID=937777 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deino
13_1_40cm_4_scaffold_10563_10
CSP1_5_NC10, NC10, Bacteria

Not on your lists

8146..8667
DNA (522bp) protein (174aa)
response regulator receiver protein id=14428717 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
response regulator receiver protein Tax=CSP1_5_NC10
response regulator receiver protein
13_1_40cm_4_scaffold_10563_11
RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8885..9505
DNA (621bp) protein (207aa)
Roadblock/LC7 family protein n=1 Tax=Methanolinea tarda NOBI-1 RepID=G6FGR7_9EURY
response regulator receiver protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated
roadblock/LC7 family protein
13_1_40cm_4_scaffold_10563_12
Mycobacterium tuberculosis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9508..11772
DNA (2265bp) protein (755aa)
PREDICTED: SH3 domain-containing protein C23A1.17-like isoform X3 n=1 Tax=Aplysia californica RepID=UPI000359EE84
Proline-rich mucin homolog {ECO:0000313|EMBL:AAD41594.1}; TaxID=1773 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source
SARP family transcriptional regulator
13_1_40cm_4_scaffold_10563_13
Lentisphaera araneosa, Lentisphaera, Lentisphaerales, Lentisphaeria, Lentisphaerae, Bacteria

Not on your lists

11774..12382
DNA (609bp) protein (203aa)
MglA protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DTW3_9BACT
MglA protein {ECO:0000313|EMBL:EDM24932.1}; TaxID=313628 species="Bacteria; Lentisphaerae; Lentisphaeria; Lentisphaerales; Lentisphaeraceae; Lentisphaera.;" source="Lentisphaera araneosa HTCC2155.;"
gliding motility protein
13_1_40cm_4_scaffold_10563_14
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists

12379..12864
DNA (486bp) protein (162aa)
Roadblock/LC7 family protein n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0MSC9_9BACT
Roadblock/LC7 family protein Tax=RBG_16_Zixibacteria_43_9_curated
roadblock/LC7 family protein
13_1_40cm_4_scaffold_10563_15
Neurospora crassa, Neurospora, Sordariales, Sordariomycetidae, Ascomycota, Fungi

Not on your lists

comp(12979..13332)
DNA (354bp) protein (118aa)
Uncharacterized protein n=2 Tax=Neurospora crassa RepID=Q1K5N7_NEUCR
Uncharacterized protein {ECO:0000313|EMBL:EAA27846.1}; TaxID=367110 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Sordariaceae; Neuro
hypothetical protein
13_1_40cm_4_scaffold_10563_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

13388..15136
DNA (1749bp) protein (583aa)
type II secretion system protein E; K02652 type IV pilus assembly protein PilB Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Type IV-A pilus assembly ATPase PilB id=3773045 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
type IV-A pilus assembly ATPase PilB
13_1_40cm_4_scaffold_10563_17
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15133..15903
DNA (771bp) protein (257aa)
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:ABS26100.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaero
hypothetical protein
13_1_40cm_4_scaffold_10563_18
Methanothermococcus okinawensis, Methanothermococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

15900..16313
DNA (414bp) protein (138aa)
Roadblock/LC7 family protein n=1 Tax=Methanothermococcus okinawensis (strain DSM 14208 / JCM 11175 / IH1) RepID=F8AKQ8_METOI
Roadblock/LC7 family protein
Roadblock/LC7 family protein {ECO:0000313|EMBL:AEH06396.1}; TaxID=647113 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanococcaceae; Methanothermococcus.;" source="Methanothermoc
13_1_40cm_4_scaffold_10563_19
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(16314..17495)
DNA (1182bp) protein (394aa)
multi-sensor hybrid histidine kinase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Putative Hybrid sensor histidine kinase id=2937937 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
PAS sensor protein
13_1_40cm_4_scaffold_10563_20
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(17492..19237)
DNA (1746bp) protein (582aa)
GAF sensor hybrid histidine kinase (EC:2.7.13.3) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Putative Hybrid sensor histidine kinase id=2862713 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
signal transduction histidine kinase
13_1_40cm_4_scaffold_10563_21
Cyanothece sp. PCC 7424, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

19485..20654
DNA (1170bp) protein (390aa)
transaldolase/EF-hand domain-containing protein (EC:2.2.1.2)
Transaldolase {ECO:0000256|HAMAP-Rule:MF_00492, ECO:0000256|RuleBase:RU004155}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00492, ECO:0000256|RuleBase:RU004155};; TaxID=65393 species="Bacteria; Cyanobacter
Transaldolase n=1 Tax=Cyanothece sp. (strain PCC 7424) RepID=B7K8A8_CYAP7
13_1_40cm_4_scaffold_10563_22
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20794..21282
DNA (489bp) protein (163aa)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000313|EMBL:ABE39598.1}; EC=5.4.3.8 {ECO:0000313|EMBL:ABE39598.1};; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bra
Glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q137Z1_RHOPS
class III aminotransferase
Displaying 22 items

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