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13_1_40cm_4_scaffold_2251

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Displaying 26 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_2251_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(1..1704)
DNA (1704bp) protein (568aa)
Oxidoreductase, molybdopterin-binding protein id=2306498 bin=GWA2_Methylomirabilis_73_35 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
molybdopterin-binding oxidoreductase Tax=GWA2_Rokubacteria_73_35_curated
oxidoreductase, molybdopterin-binding protein
13_1_40cm_4_scaffold_2251_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1754..3184
DNA (1431bp) protein (477aa)
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein; K07516 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Fatty oxidation complex, alpha subunit id=4279011 bin=GWA2_Methylomirabilis_73_35 species=Afipia broomeae genus=Afipia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein
13_1_40cm_4_scaffold_2251_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

3189..3812
DNA (624bp) protein (208aa)
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein; K07516 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] Tax=GWA2_Rokubacteria_73_35_curated
pimF; enoyl-CoA hydratase (EC:1.1.1.35 4.2.1.17)
Fatty oxidation complex, alpha subunit id=4279011 bin=GWA2_Methylomirabilis_73_35 species=Afipia broomeae genus=Afipia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_2251_4
CSP1_5_NC10, NC10, Bacteria

Not on your lists

4023..6218
DNA (2196bp) protein (732aa)
hypothetical protein id=14431380 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=bin3_NC10 organism_group=NC10
hypothetical protein Tax=CSP1_5_NC10
hypothetical protein
13_1_40cm_4_scaffold_2251_5
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(6235..6639)
DNA (405bp) protein (135aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
13_1_40cm_4_scaffold_2251_6
unknown

Not on your lists

6759..7733
DNA (975bp) protein (325aa)

This feature has no annotations

13_1_40cm_4_scaffold_2251_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7709..8830
DNA (1122bp) protein (374aa)
Putative dehydratase, YjhG/YagF family n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DMC5_SINAD
dehydratase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
dehydratase
13_1_40cm_4_scaffold_2251_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

8865..10223
DNA (1359bp) protein (453aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein id=14430829 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin3_NC10 organism_group=NC10
hypothetical protein
13_1_40cm_4_scaffold_2251_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

10189..11205
DNA (1017bp) protein (339aa)
Methyltransferase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FA12_CONWI
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
methyltransferase
13_1_40cm_4_scaffold_2251_10
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

11202..11966
DNA (765bp) protein (255aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
13_1_40cm_4_scaffold_2251_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(11952..13472)
DNA (1521bp) protein (507aa)
Glr0890 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NM78_GLOVI
ABC transporter permease; K05846 osmoprotectant transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
ABC transporter permease
13_1_40cm_4_scaffold_2251_12
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(13474..14211)
DNA (738bp) protein (246aa)
hypothetical protein n=1 Tax=Methylosinus sp. LW4 RepID=UPI00035FA608
ABC transporter-like protein; K05847 osmoprotectant transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
ABC transporter-like protein
13_1_40cm_4_scaffold_2251_13

Not on your lists

comp(14237..14665)
DNA (429bp) protein (143aa)
CBS domain containing protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CGW6_THET1
Uncharacterized protein {ECO:0000313|EMBL:KKN10447.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
13_1_40cm_4_scaffold_2251_14

Not on your lists

comp(14741..14977)
DNA (237bp) protein (79aa)
ArsR family transcriptional regulator n=1 Tax=Mycobacterium kansasii ATCC 12478 RepID=U5WV85_MYCKA
Uncharacterized protein {ECO:0000313|EMBL:KKN10446.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ArsR family transcriptional regulator
13_1_40cm_4_scaffold_2251_15
Cupriavidus sp. HPC(L), Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15015..15446)
DNA (432bp) protein (144aa)
Membrane protein n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2JCQ0_9BURK
Membrane protein {ECO:0000313|EMBL:ESJ25721.1}; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HPC(L).;"
hypothetical protein
13_1_40cm_4_scaffold_2251_16
RBG_16_Deltaproteobacteria_50_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15468..16364)
DNA (897bp) protein (299aa)
Putative permease, DMT superfamily n=1 Tax=Microvirga sp. WSM3557 RepID=I4YZX5_9RHIZ
hypothetical protein DUF6 Tax=RBG_16_Deltaproteobacteria_50_11_curated
hypothetical protein
13_1_40cm_4_scaffold_2251_17
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(16346..17272)
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8U012_9PROT
MarR family transcriptional regulator {ECO:0000313|EMBL:KIF18166.1}; TaxID=1245923 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
MarR family transcriptional regulator with acetyltransferase activity
13_1_40cm_4_scaffold_2251_18
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(17325..17516)
DNA (192bp) protein (64aa)
phosphoenolpyruvate-protein kinase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
13_1_40cm_4_scaffold_2251_19
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17680..17970)
DNA (291bp) protein (97aa)
Uncharacterized protein {ECO:0000313|EMBL:ETW97051.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
id=1956518 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
13_1_40cm_4_scaffold_2251_20
unknown

Not on your lists

comp(17974..18192)
DNA (219bp) protein (73aa)

This feature has no annotations

13_1_40cm_4_scaffold_2251_21
Haloplasma contractile, Haloplasma, Haloplasmatales, Bacteria

Not on your lists

18248..18493
DNA (246bp) protein (82aa)
Alkylhydroperoxidase AhpD core protein n=1 Tax=Haloplasma contractile SSD-17B RepID=U2E7Y4_9BACT
Alkylhydroperoxidase AhpD core protein {ECO:0000313|EMBL:ERJ10996.1}; TaxID=1033810 species="Bacteria; Haloplasmatales; Haloplasmataceae; Haloplasma.;" source="Haloplasma contractile SSD-17B.;"
putative peroxidase
13_1_40cm_4_scaffold_2251_22

Not on your lists

18554..18805
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0HZ90_CALAS
Marine sediment metagenome DNA, contig: S01H1_S38078 {ECO:0000313|EMBL:GAG46335.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
hypothetical protein
13_1_40cm_4_scaffold_2251_23
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

18865..20733
DNA (1869bp) protein (623aa)
aor6; tungsten-containing aldehyde ferredoxin oxidoreductase Aor (EC:1.2.7.5) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
aldehyde:ferredoxin oxidoreductase id=14627822 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin7_NC10_sister organism_group=NC10
aldehyde:ferredoxin oxidoreductase
13_1_40cm_4_scaffold_2251_24
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20733..21719
DNA (987bp) protein (329aa)
aldo/keto reductase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
Putative oxidoreductase, aryl-alcohol dehydrogenase like protein id=2306537 bin=GWA2_Methylomirabilis_73_35 species=Microvirga sp. WSM3557 genus=Microvirga taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
aldo/keto reductase
13_1_40cm_4_scaffold_2251_25
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21719..22549
DNA (831bp) protein (277aa)
taurine dioxygenase; K03119 taurine dioxygenase [EC:1.14.11.17] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
Taurine dioxygenase n=1 Tax=Oceanibaculum indicum P24 RepID=K2JMG7_9PROT
taurine dioxygenase
13_1_40cm_4_scaffold_2251_26
RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22575..23048)
DNA (474bp) protein (158aa)
hydrolase Tax=RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated
Putative hydrolase id=4622339 bin=GWC2_Geobacteraceae_55_20 species=Clostridium tetani genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria
beta-lactamase domain protein
Displaying 26 items

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