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13_1_40cm_4_scaffold_472

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Displaying items 1-30 of 50 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_472_1
unknown

Not on your lists

comp(2..136)
DNA (135bp) protein (45aa)

This feature has no annotations

13_1_40cm_4_scaffold_472_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(312..878)
DNA (567bp) protein (189aa)
metal-dependent phosphoesterase; K07053 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein id=14627812 bin=bin7_NC10_sister species=Kaistia granuli genus=Kaistia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_4_scaffold_472_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(883..1311)
DNA (429bp) protein (143aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_40cm_4_scaffold_472_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1308..2666)
DNA (1359bp) protein (453aa)
MmgE/PrpD family protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=14627809 bin=bin7_NC10_sister species=Azoarcus toluclasticus genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
MmgE/PrpD family protein
13_1_40cm_4_scaffold_472_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2689..4275
DNA (1587bp) protein (529aa)
id=14627808 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_40cm_4_scaffold_472_6
unknown

Not on your lists

4272..4646
DNA (375bp) protein (125aa)

This feature has no annotations

13_1_40cm_4_scaffold_472_7
Gloeocapsa sp. PCC 7428, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(4550..4978)
DNA (429bp) protein (143aa)
Multi-sensor hybrid histidine kinase n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9XG41_9CHRO
multi-sensor hybrid histidine kinase
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:AFZ30627.1}; TaxID=1173026 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeocapsa.;" source="Gloeocapsa sp. PCC 7428.
13_1_40cm_4_scaffold_472_trna_1
unknown

Not on your lists

comp(5094..5167)
DNA (74bp)
transferRNA
13_1_40cm_4_scaffold_472_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

5330..6460
DNA (1131bp) protein (377aa)
monogalactosyldiacylglycerol synthase; K03429 1,2-diacylglycerol 3-glucosyltransferase [EC:2.4.1.157] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Monogalactosyldiacylglycerol synthase id=3955122 bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
monogalactosyldiacylglycerol synthase
13_1_40cm_4_scaffold_472_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6457..7155
DNA (699bp) protein (233aa)
polysaccharide deacetylase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Polysaccharide deacetylase id=3955121 bin=GWA2_Methylomirabilis_73_35 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
polysaccharide deacetylase
13_1_40cm_4_scaffold_472_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(7113..8579)
DNA (1467bp) protein (489aa)
Radical SAM domain protein id=2216072 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Acidiphilium taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
radical SAM domain-containing protein Tax=GWA2_Rokubacteria_73_35_curated
hopanoid biosynthesis associated radical SAM protein HpnJ
13_1_40cm_4_scaffold_472_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(8589..10226)
DNA (1638bp) protein (546aa)
glycosyl transferase family protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase id=3955120 bin=GWA2_Methylomirabilis_73_35 species=Terriglobus roseus genus=Terriglobus taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
4-amino-4-deoxy-L-arabinose transferase
13_1_40cm_4_scaffold_472_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(10331..10684)
DNA (354bp) protein (118aa)
Membrane protein, putative n=2 Tax=Geobacter sulfurreducens RepID=D7AHT6_GEOSK
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_1_40cm_4_scaffold_472_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(10684..11103)
DNA (420bp) protein (140aa)
id=3870377 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
id=3870377 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_472_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(11274..11990)
DNA (717bp) protein (239aa)
putative ABC transporter ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ABC-type antimicrobial peptide transport system, ATPase component id=3955117 bin=GWA2_Methylomirabilis_73_35 species=Janthinobacterium sp. HH01 genus=Janthinobacterium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter ATP-binding protein
13_1_40cm_4_scaffold_472_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(11980..13101)
DNA (1122bp) protein (374aa)
ABC transporter permease; K02004 putative ABC transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative ABC transporter permease protein id=3955116 bin=GWA2_Methylomirabilis_73_35 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter permease
13_1_40cm_4_scaffold_472_16
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(13375..14643)
DNA (1269bp) protein (423aa)
monooxygenase FAD-binding protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Flavin-dependent dehydrogenase id=2980067 bin=GWC2_Methylomirabilis_70_16 species=Xanthomonas gardneri genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hydroxylase
13_1_40cm_4_scaffold_472_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(14640..15695)
DNA (1056bp) protein (352aa)
glycosyl transferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Glycosyltransferase involved in cell wall biogenesis id=3870373 bin=GWF2_Methylomirabilis_70_14 species=Granulibacter bethesdensis genus=Granulibacter taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
family 2 glycosyl transferase
13_1_40cm_4_scaffold_472_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(15692..16762)
DNA (1071bp) protein (357aa)
beta-ketoacyl-acyl-carrier-protein synthase II (EC:2.3.1.179); K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
beta-ketoacyl-acyl-carrier-protein synthase II (EC:2.3.1.179)
Beta-ketoacyl synthase id=3870372 bin=GWF2_Methylomirabilis_70_14 species=Thermomonospora curvata genus=Thermomonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_472_19
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(16762..17946)
DNA (1185bp) protein (395aa)
Beta-ketoacyl synthase; K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] Tax=GWA2_Rokubacteria_70_23_curated
3-oxoacyl-(acyl-carrier-protein) synthase II (EC:2.3.1.41)
Beta-ketoacyl synthase id=3713926 bin=GWC2_Methylomirabilis_70_16 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_4_scaffold_472_20
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(17943..18218)
DNA (276bp) protein (92aa)
hypothetical protein; K02078 acyl carrier protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein; K02078 acyl carrier protein id=14627962 bin=bin7_NC10_sister species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_4_scaffold_472_21
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(18226..18999)
DNA (774bp) protein (258aa)
beta-ketoacyl synthase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
putative 3-oxoacyl-ACP synthase I id=14627961 bin=bin7_NC10_sister species=Streptomyces rapamycinicus genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
3-oxoacyl-ACP synthase
13_1_40cm_4_scaffold_472_22
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(18996..20153)
DNA (1158bp) protein (386aa)
3-oxoacyl-ACP synthase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
3-oxoacyl-[acyl-carrier-protein] synthase 2 id=3713931 bin=GWC2_Methylomirabilis_70_16 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
3-oxoacyl-ACP synthase
13_1_40cm_4_scaffold_472_23
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(20150..20920)
DNA (771bp) protein (257aa)
Uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=4785125 bin=GWC2_Methylomirabilis_70_24 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_1_40cm_4_scaffold_472_24
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

20997..21983
DNA (987bp) protein (329aa)
dihydroorotate dehydrogenase (EC:1.3.98.1); K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
dihydroorotate dehydrogenase (EC:1.3.98.1); K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] id=14627933 bin=bin7_NC10_sister species=Mycobacterium sp. 155 genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
dihydroorotate dehydrogenase 2 (EC:1.3.3.1)
13_1_40cm_4_scaffold_472_25
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

22299..22538
DNA (240bp) protein (80aa)
id=4430353 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
id=14627932 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_4_scaffold_472_26
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(22480..22965)
DNA (486bp) protein (162aa)
putative glyoxalase; K07104 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
putative glyoxalase; K07104 id=14627931 bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
putative glyoxalase
13_1_40cm_4_scaffold_472_27
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(22970..23176)
DNA (207bp) protein (69aa)
DNA repair protein RadC; K03630 DNA repair protein RadC Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
DNA repair protein RadC id=4773671 bin=GWC2_Methylomirabilis_70_16 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
radC; DNA repair protein RadC
13_1_40cm_4_scaffold_472_28
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(23688..24116)
DNA (429bp) protein (143aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=14629111 bin=bin8_Chloro species=Verrucomicrobium sp. 3C genus=Verrucomicrobium taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein
13_1_40cm_4_scaffold_472_29
GWA2_RIF01_43_8_curated, RIF1, Bacteria

Not on your lists

comp(24110..24403)
DNA (294bp) protein (98aa)
Uncharacterized protein Tax=GWA2_RIF01_43_8_curated
Uncharacterized protein id=4189584 bin=GWF2_Methylomirabilis_70_14 species=Ilumatobacter coccineus genus=Ilumatobacter taxon_order=Acidimicrobiales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
prevent-host-death family protein
Displaying items 1-30 of 50 in total

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