ggKbase home page

13_1_40cm_4_scaffold_644_11

Organism: 13_1_40CM_4_Rokubacteria_71_6

partial RP 19 / 55 MC: 9 BSCG 20 / 51 MC: 5 ASCG 9 / 38 MC: 2
Location: 7735..8607

Top 3 Functional Annotations

Value Algorithm Source
dihydrouridine synthase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 75.9
  • Coverage: 290.0
  • Bit_score: 435
  • Evalue 6.30e-119
tRNA-dihydrouridine synthase id=3938344 bin=GWF2_Methylomirabilis_70_14 species=Clostridium clariflavum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 60.5
  • Coverage: 296.0
  • Bit_score: 358
  • Evalue 5.30e-96
nifR3; TIM barrel oxidoreductase NifR3 similarity KEGG
DB: KEGG
  • Identity: 48.4
  • Coverage: 283.0
  • Bit_score: 260
  • Evalue 7.30e-67

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Rokubacteria_71_22 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 873
ATGGCCGGCGTGACCAACGCGCCGTTCCGGCTCGTCGCCCGCGAGTGCGGCGCCGGCCGCCTCACCAGCGAGGAGATCGACGCGCGCGCGCTCGTGCGCGACAACGCGCGGACGGTGGCCCTCACCGCCTACCTGCCCGAGGAGCGGCCGCTCGCCATGCAATTGCTCGGCGAGGATCCCGACCTGCTCGCGGAGGCGGCGCGGCGGCTGGAGGCCGCGGGCGCCGACGGCATCGACCTCAACATGGGCTGCCCGGTGGCGAAGATCGTGGCCAAGGGCCAGGGGGCGGCGCTGATGCGCGACCCGCTGCGCGCCGGCGTCATCTTTCGCACGCTGCGCAAGGCGGTCGCCGGCCCCCTCACCATCAAGATCCGCGGCGGCTGGGACGACCGTACCGTCAACGCGGCGGAGATCGCGCGGCTCGCCGAGAGCGAGGGCGTGGACGGCGTCACCGTGCACCCGCGCACGCGCAGCCAGCAGTACACGGGACGCGCGCCGTGGGACGTGATCGCGGAGGTCGTCGCCGCCGTCCGCGTGCCGGTCACCGGCAACGGCGACGTCAAGAGCCACGCCGATGCGGCCGCGATGGTCGCCGCCACCGGCTGCGCGGCCGTGATGATCGGGCGCGGCGCCCTCGGCCGGCCGTGGATCTTCCGCGGCGTCGAGGTGTCGCGCGGCGCGCGCGCGGCCATCATCCGCCGCCACTGCACGCTGGTCGAAGCGCACCTGCCGGAGCGCCCGGCGCTCGTGCAGCTCAAGAAGCACCTCGCGTGGTACTCGGACGGCCTGCCGTTCGCGGCGCGCGCGCGCCCGGCGATCTTCGCCGCGCGCACGCCCGCCGAGGTGCACGACGTGTTCTGGCGGCTCTGGTGA
PROTEIN sequence
Length: 291
MAGVTNAPFRLVARECGAGRLTSEEIDARALVRDNARTVALTAYLPEERPLAMQLLGEDPDLLAEAARRLEAAGADGIDLNMGCPVAKIVAKGQGAALMRDPLRAGVIFRTLRKAVAGPLTIKIRGGWDDRTVNAAEIARLAESEGVDGVTVHPRTRSQQYTGRAPWDVIAEVVAAVRVPVTGNGDVKSHADAAAMVAATGCAAVMIGRGALGRPWIFRGVEVSRGARAAIIRRHCTLVEAHLPERPALVQLKKHLAWYSDGLPFAARARPAIFAARTPAEVHDVFWRLW*