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13_1_40cm_4_scaffold_1462

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Displaying 13 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1462_1
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(137..706)
DNA (570bp) protein (190aa)
Transcription termination/antitermination protein NusG n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D9P2_9BACT
nusG; transcription antiterminator NusG; K02601 transcriptional antiterminator NusG Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
nusG; transcription antiterminator NusG
13_1_40cm_4_scaffold_1462_2
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(710..928)
DNA (219bp) protein (73aa)
Preprotein translocase, SecE subunit n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D9P3_9BACT
Preprotein translocase, SecE subunit {ECO:0000313|EMBL:EDY16824.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
secE; preprotein translocase subunit SecE
13_1_40cm_4_scaffold_1462_trna_2
unknown

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comp(1042..1114)
DNA (73bp)
transferRNA
13_1_40cm_4_scaffold_1462_3
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(1134..2318)
DNA (1185bp) protein (395aa)
elongation factor Tu n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745BD9
elongation factor Tu; K02358 elongation factor Tu Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
tufB; elongation factor Tu
13_1_40cm_4_scaffold_1462_trna_1
unknown

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comp(2392..2464)
DNA (73bp)
transferRNA
13_1_40cm_4_scaffold_1462_4
Crinalium epipsammum, Crinalium, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(2731..3654)
DNA (924bp) protein (308aa)
Tetratricopeptide TPR_1 repeat-containing protein n=1 Tax=Crinalium epipsammum PCC 9333 RepID=K9W380_9CYAN
hypothetical protein
Tetratricopeptide TPR_1 repeat-containing protein {ECO:0000313|EMBL:AFZ14818.1}; Flags: Precursor;; TaxID=1173022 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Crinalium.;"
13_1_40cm_4_scaffold_1462_5
RBG_13_Planctomycetes_44_8b_curated, Physcisphaerae, Planctomycetes, Bacteria

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3731..4702
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Haemophilus parasuis ZJ0906 RepID=R9XLM7_HAEPR
drug/metabolite exporter family transporter Tax=RBG_13_Planctomycetes_44_8b_curated
hypothetical protein
13_1_40cm_4_scaffold_1462_6
unknown

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4764..4952
DNA (189bp) protein (63aa)

This feature has no annotations

13_1_40cm_4_scaffold_1462_7
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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5050..5934
DNA (885bp) protein (295aa)
Polyprenyl synthetase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D1D0_9BACT
Polyprenyl synthetase {ECO:0000313|EMBL:EDY19542.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
ispA; Geranylgeranyl pyrophosphate synthase
13_1_40cm_4_scaffold_1462_8
unknown

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comp(5910..6341)
DNA (432bp) protein (144aa)

This feature has no annotations

13_1_40cm_4_scaffold_1462_9
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(6366..7436)
DNA (1071bp) protein (357aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00195365}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-th
glycoprotease family metalloendopeptidase (EC:3.4.24.57)
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D1C8_9BACT
13_1_40cm_4_scaffold_1462_10

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comp(7511..8845)
DNA (1335bp) protein (445aa)
carboxy-terminal processing protease (EC:3.4.21.102)
Carboxyl-terminal protease n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D1C7_9BACT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48347.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_1_40cm_4_scaffold_1462_11

Not on your lists

8920..10686
DNA (1767bp) protein (589aa)
Uncharacterized protein n=1 Tax=Flavobacterium sp. CF136 RepID=J2JN01_9FLAO
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48348.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
protein of unknown function DUF885
Displaying 13 items

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