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13_1_40cm_4_scaffold_207

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Displaying 25 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_207_1
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(3..2084)
DNA (2082bp) protein (694aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spa
ribonuclease R (EC:3.1.13.1)
Ribonuclease R n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6L0_9BACT
13_1_40cm_4_scaffold_207_2
RIFOXYD2_FULL_RIF_OD1_02_43_21_curated, RIF-OD1-2, Parcubacteria, Bacteria

Not on your lists

2145..2666
DNA (522bp) protein (174aa)
PEBP family protein; K06910 Tax=RIFOXYD2_FULL_RIF_OD1_02_43_21_curated
PEBP family protein id=1718107 bin=GWB2_Deltaproteobacteria_65_81 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
PEBP family protein
13_1_40cm_4_scaffold_207_3
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

2819..3607
DNA (789bp) protein (263aa)
Dihydropteroate synthase {ECO:0000256|RuleBase:RU361205}; Short=DHPS {ECO:0000256|RuleBase:RU361205};; EC=2.5.1.15 {ECO:0000256|RuleBase:RU361205};; Dihydropteroate pyrophosphorylase {ECO:0000256|Rule
dihydropteroate synthase (EC:2.5.1.15)
Dihydropteroate synthase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D2A5_9BACT
13_1_40cm_4_scaffold_207_4

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3604..4479
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D2A6_9BACT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48990.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
13_1_40cm_4_scaffold_207_5
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(4532..4996)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D712_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY17663.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
13_1_40cm_4_scaffold_207_6
unknown

Not on your lists

5398..5550
DNA (153bp) protein (51aa)

This feature has no annotations

13_1_40cm_4_scaffold_207_7
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

5547..6659
DNA (1113bp) protein (371aa)
Cell cycle protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CVG6_9BACT
Cell cycle protein {ECO:0000313|EMBL:EDY21408.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
rodA; Rod shape-determining protein rodA
13_1_40cm_4_scaffold_207_8
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

6759..7484
DNA (726bp) protein (242aa)
Chromosome segregation and condensation protein ScpA n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D7X7_9BACT
Segregation and condensation protein A {ECO:0000256|SAAS:SAAS00093938}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
scpA; chromosome segregation and condensation protein ScpA
13_1_40cm_4_scaffold_207_9
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

7497..8369
DNA (873bp) protein (291aa)
shikimate kinase n=1 Tax=Verrucomicrobium spinosum RepID=UPI000174641E
ActC family protein {ECO:0000313|EMBL:EDY20026.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
NAD-dependent epimerase/dehydratase
13_1_40cm_4_scaffold_207_10
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(8366..9391)
DNA (1026bp) protein (342aa)
ABC transporter-related protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CVW4_9BACT
ABC transporter-related protein {ECO:0000313|EMBL:EDY21556.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
ABC transporter
13_1_40cm_4_scaffold_207_11
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(9451..10323)
DNA (873bp) protein (291aa)
Alanine--glyoxylate transaminase {ECO:0000313|EMBL:EDY22201.1}; EC=2.6.1.44 {ECO:0000313|EMBL:EDY22201.1};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="C
alanine--glyoxylate transaminase (EC:2.6.1.44)
Alanine--glyoxylate transaminase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUG3_9BACT
13_1_40cm_4_scaffold_207_12
unknown

Not on your lists

10393..10569
DNA (177bp) protein (59aa)

This feature has no annotations

13_1_40cm_4_scaffold_207_13
Deinococcus peraridilitoris, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(10592..11104)
DNA (513bp) protein (171aa)
Putative membrane protein n=1 Tax=Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416 / KR-200) RepID=L0A2K6_DEIPD
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AFZ67432.1}; TaxID=937777 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus peraridilito
13_1_40cm_4_scaffold_207_14
Thermoplasmatales archaeon A-plasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

11269..11676
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003676B53
Uncharacterized protein {ECO:0000313|EMBL:EQB67844.1}; TaxID=667135 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; environmental samples.;" source="Thermoplasmatales archaeon A-pl
hypothetical protein
13_1_40cm_4_scaffold_207_15
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

11790..12509
DNA (720bp) protein (240aa)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5H9_9BACT
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:EDY18384.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
13_1_40cm_4_scaffold_207_16
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists


comp(12544..12939)
DNA (396bp) protein (132aa)
30S ribosomal protein S9 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CV51_9BACT
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter fla
30S ribosomal protein S9
13_1_40cm_4_scaffold_207_17
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists


comp(12949..13548)
DNA (600bp) protein (200aa)
50S ribosomal protein L13 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CV50_9BACT
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter fl
50S ribosomal protein L13
13_1_40cm_4_scaffold_207_18
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

13737..13994
DNA (258bp) protein (86aa)
Uncharacterized protein with SCP/PR1 domains n=1 Tax=Nostoc sp. (strain ATCC 29411 / PCC 7524) RepID=K9QUT2_NOSS7
Serine protease {ECO:0000313|EMBL:KIF36631.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
hypothetical protein
13_1_40cm_4_scaffold_207_19
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists


14175..15710
DNA (1536bp) protein (512aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01571}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01571};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01571}; TaxID=497964 species="Bacteria; Verruc
Proline--tRNA ligase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0N0_9BACT
proS; Prolyl-tRNA synthetase
13_1_40cm_4_scaffold_207_20
unknown

Not on your lists

comp(15928..16149)
DNA (222bp) protein (74aa)

This feature has no annotations

13_1_40cm_4_scaffold_207_21
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

16151..16966
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D245_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY19285.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
13_1_40cm_4_scaffold_207_22
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(17058..17618)
DNA (561bp) protein (187aa)
Ribosome-recycling factor n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DCQ4_9BACT
ribosome recycling factor; K02838 ribosome recycling factor Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
ribosome recycling factor
13_1_40cm_4_scaffold_207_23
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(17631..18371)
DNA (741bp) protein (247aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197
Uridylate kinase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DCQ3_9BACT
pyrH; uridylate kinase
13_1_40cm_4_scaffold_207_24
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(18457..19398)
DNA (942bp) protein (314aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043680}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=497964 species="B
Methionyl-tRNA formyltransferase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CYD2_9BACT
methionyl-tRNA formyltransferase
13_1_40cm_4_scaffold_207_25
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(19405..19563)
DNA (159bp) protein (53aa)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
Displaying 25 items

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