ggKbase home page

13_1_40cm_4_scaffold_3595

Search features with annotation key words

Displaying 21 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_3595_1
Pelobacter carbinolicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..560
DNA (558bp) protein (186aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=338963 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadal
Methylenetetrahydrofolate reductase n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A3T2_PELCD
metF-1; 5,10-methylenetetrahydrofolate reductase
13_1_40cm_4_scaffold_3595_2
Bacillus methanolicus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

875..1141
DNA (267bp) protein (89aa)
yitJ; Bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase (EC:2.1.1.10)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=796606 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillu
Methylenetetrahydrofolate reductase n=1 Tax=Bacillus methanolicus MGA3 RepID=I3E8N4_BACMT
13_1_40cm_4_scaffold_3595_3
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

1160..1936
DNA (777bp) protein (259aa)
SNARE associated Golgi protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DBI0_9BACT
SNARE associated Golgi protein {ECO:0000313|EMBL:EDY16167.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin4
hypothetical protein
13_1_40cm_4_scaffold_3595_4
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

1995..3932
DNA (1938bp) protein (646aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DBR5_9BACT
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=497964 species="Bacter
gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
13_1_40cm_4_scaffold_3595_5
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

3938..4525
DNA (588bp) protein (196aa)
Glycerol-3-phosphate acyltransferase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XR53_9BACT
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:000025
membrane protein
13_1_40cm_4_scaffold_3595_6
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

4645..5523
DNA (879bp) protein (293aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D2N3_9BACT
NAD-dependent glycerol-3-phosphate dehydrogenase domain-containing protein
13_1_40cm_4_scaffold_3595_7
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(5520..6110)
DNA (591bp) protein (197aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_019
Phosphoribosylglycinamide formyltransferase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CU39_9BACT
purN; Folate-dependent phosphoribosylglycinamide formyltransferase PurN
13_1_40cm_4_scaffold_3595_8
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(6107..6586)
DNA (480bp) protein (160aa)
ADP-heptose synthase n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001744EB3
Cytidyltransferase-related domain protein {ECO:0000313|EMBL:EDY22076.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
rfaE bifunctional protein
13_1_40cm_4_scaffold_3595_9
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6583..7473)
DNA (891bp) protein (297aa)
Diacylglycerol kinase catalytic region n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B5F5_HERA2
Transcription regulator {ECO:0000313|EMBL:EYF05822.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondrom
diacylglycerol kinase catalytic protein
13_1_40cm_4_scaffold_3595_10
unknown

Not on your lists

7561..8352
DNA (792bp) protein (264aa)

This feature has no annotations

13_1_40cm_4_scaffold_3595_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(8424..9866)
DNA (1443bp) protein (481aa)
amino acid transporter Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative uncharacterized protein id=4983172 bin=GWA2_Elusimicrobia_56_46 species=Pedobacter saltans genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
amino acid permease-associated region
13_1_40cm_4_scaffold_3595_12
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(9914..11443)
DNA (1530bp) protein (510aa)
amino acid transporter n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B54BD9
amino acid permease Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
amino acid permease
13_1_40cm_4_scaffold_3595_13
Robiginitalea biformata, Robiginitalea, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

11565..12566
DNA (1002bp) protein (334aa)
Putative uncharacterized protein n=1 Tax=Robiginitalea biformata (strain ATCC BAA-864 / HTCC2501 / KCTC 12146) RepID=A4CGE9_ROBBH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EAR16007.1}; TaxID=313596 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Robiginitalea.;" source="Robiginitalea biform
13_1_40cm_4_scaffold_3595_14
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12846..13109
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. AP07 RepID=J2GL69_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:EJL23383.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. A
hypothetical protein
13_1_40cm_4_scaffold_3595_15
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

13136..14083
DNA (948bp) protein (316aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00035EECB9
Nucleotidyl transferase {ECO:0000313|EMBL:EDY19353.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
nucleotidyl transferase
13_1_40cm_4_scaffold_3595_16
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

14120..15082
DNA (963bp) protein (321aa)
Aminoglycoside phosphotransferase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D2B2_9BACT
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:EDY19352.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
phosphotransferase related to Ser/Thr protein kinases
13_1_40cm_4_scaffold_3595_17
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(15160..15771)
DNA (612bp) protein (204aa)
Beta-lactamase domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6P0_9BACT
Beta-lactamase domain protein {ECO:0000313|EMBL:EDY17841.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
beta-lactamase domain-containing protein
13_1_40cm_4_scaffold_3595_18
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

15940..18141
DNA (2202bp) protein (734aa)
Carboxyl-terminal protease {ECO:0000313|EMBL:EDY17842.1}; EC=3.4.21.102 {ECO:0000313|EMBL:EDY17842.1};; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobact
Carboxyl-terminal protease n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6P1_9BACT
prc; Periplasmic protease
13_1_40cm_4_scaffold_3595_19
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(18166..18810)
DNA (645bp) protein (215aa)
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DAY0_9BACT
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:EDY16354.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus El
erfK; hypothetical protein
13_1_40cm_4_scaffold_3595_20

Not on your lists

comp(18875..19669)
DNA (795bp) protein (265aa)
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215270}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:000
thyA; thymidylate synthase (EC:2.1.1.45)
Thymidylate synthase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XJM3_9BACT
13_1_40cm_4_scaffold_3595_21
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

20029..20139
DNA (111bp) protein (37aa)
Chaperone protein DnaK n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D8E8_9BACT
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP
dnaK; molecular chaperone DnaK
Displaying 21 items

View Taxonomy