ggKbase home page

13_1_40cm_4_scaffold_9721

Search features with annotation key words

Displaying 19 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_9721_1
unknown

Not on your lists

1..276
DNA (276bp) protein (92aa)

This feature has no annotations

13_1_40cm_4_scaffold_9721_2
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

215..592
DNA (378bp) protein (126aa)
ATP-dependent dethiobiotin synthetase BioD {ECO:0000256|HAMAP-Rule:MF_00336}; EC=6.3.3.3 {ECO:0000256|HAMAP-Rule:MF_00336};; DTB synthetase {ECO:0000256|HAMAP-Rule:MF_00336}; Dethiobiotin synthase {EC
dethiobiotin synthase (EC:6.3.3.3)
ATP-dependent dethiobiotin synthetase BioD n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D2A8_9BACT
13_1_40cm_4_scaffold_9721_3
unknown

Not on your lists

851..1327
DNA (477bp) protein (159aa)

This feature has no annotations

13_1_40cm_4_scaffold_9721_4
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(1517..2692)
DNA (1176bp) protein (392aa)
Tyrosine--tRNA ligase {ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|SAAS:SAAS00105716};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniob
tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosyl-tRNA synthetase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0P4_9BACT
13_1_40cm_4_scaffold_9721_5
unknown

Not on your lists

comp(2727..3332)
DNA (606bp) protein (202aa)

This feature has no annotations

13_1_40cm_4_scaffold_9721_6
Photobacterium gaetbulicola, Photobacterium, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3381..3593
DNA (213bp) protein (71aa)
hypothetical protein n=1 Tax=Methylosarcina fibrata RepID=UPI00036EDA1D
Uncharacterized protein {ECO:0000313|EMBL:KHT62092.1}; TaxID=1295392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium.;" source="Photobacterium gaetbul
hypothetical protein
13_1_40cm_4_scaffold_9721_7
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(3597..3899)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CXD1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY20929.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
13_1_40cm_4_scaffold_9721_8
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(3949..4215)
DNA (267bp) protein (89aa)
SAM-dependent methyltransferase-like protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUH2_9BACT
SAM-dependent methyltransferase-like protein {ECO:0000313|EMBL:EDY22210.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
13_1_40cm_4_scaffold_9721_9
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(4175..4843)
DNA (669bp) protein (223aa)
SAM-dependent methyltransferase-like protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUH2_9BACT
SAM-dependent methyltransferase-like protein {ECO:0000313|EMBL:EDY22210.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
SAM-dependent methyltransferase
13_1_40cm_4_scaffold_9721_10
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

4976..5848
DNA (873bp) protein (291aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|
Homoserine kinase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D1X4_9BACT
thrB; homoserine kinase
13_1_40cm_4_scaffold_9721_11
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

5832..7022
DNA (1191bp) protein (397aa)
Tetraacyldisaccharide 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093884}; EC=2.7.1.130 {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093878};; Lipid A 4'-kinase {ECO
Tetraacyldisaccharide 4'-kinase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D1X3_9BACT
tetraacyldisaccharide 4'-kinase
13_1_40cm_4_scaffold_9721_12
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

7168..8085
DNA (918bp) protein (306aa)
DNA primase-like protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IMN6_KORVE
DNA primase-like protein
DNA primase-like protein {ECO:0000313|EMBL:ABF41864.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (stra
13_1_40cm_4_scaffold_9721_13
unknown

Not on your lists

8329..8550
DNA (222bp) protein (74aa)

This feature has no annotations

13_1_40cm_4_scaffold_9721_14
RLO_PLX_64_10, Bacteria

Not on your lists

8757..9275
DNA (519bp) protein (173aa)
Cupin 2 conserved barrel domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CWL1_9BACT
cupin Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
cupin
13_1_40cm_4_scaffold_9721_15
RLO_PLX_64_10, Bacteria

Not on your lists

9357..9845
DNA (489bp) protein (163aa)
Cupin 2 conserved barrel domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CWL1_9BACT
cupin Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
cupin
13_1_40cm_4_scaffold_9721_16
unknown

Not on your lists

comp(9967..10125)
DNA (159bp) protein (53aa)

This feature has no annotations

13_1_40cm_4_scaffold_9721_17
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10214..10672
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BYS6_NITHN
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
hypothetical protein
13_1_40cm_4_scaffold_9721_18
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(10731..11207)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D897_9BACT
lolE; ABC transporter permease; K09808 lipoprotein-releasing system permease protein Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
lolE; ABC transporter permease
13_1_40cm_4_scaffold_9721_19
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(11204..11629)
DNA (426bp) protein (142aa)
ABC-type transport system, involved in lipoprotein release, permease component n=1 Tax=Methylacidiphilum infernorum (isolate V4) RepID=B3DXN0_METI4
lolE; ABC transporter permease; K09808 lipoprotein-releasing system permease protein Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
lolE; ABC transporter permease
Displaying 19 items

View Taxonomy