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13_1_40cm_4_scaffold_42094

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_42094_1
RLO_Entotheonella_69_37, Entotheonella, Bacteria

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2..484
DNA (483bp) protein (161aa)
Hypothetical conserved protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SSM7_9BACT
hypothetical protein; K06888 Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
hypothetical protein
13_1_40cm_4_scaffold_42094_2

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706..933
DNA (228bp) protein (76aa)
Marine sediment metagenome DNA, contig: S06H3_L07952 {ECO:0000313|EMBL:GAI25218.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
cold shock protein CspA family protein id=14424909 bin=bin1_lowGC species=Enterococcus durans genus=Enterococcus taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
cold-shock DNA-binding protein family
13_1_40cm_4_scaffold_42094_3
Ralstonia syzygii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1030..2019)
DNA (990bp) protein (330aa)
Protein TolB n=1 Tax=Ralstonia syzygii R24 RepID=G3A5S3_9RALS
WD40 domain-containing protein
Protein TolB {ECO:0000256|HAMAP-Rule:MF_00671}; Flags: Precursor;; TaxID=907261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia
13_1_40cm_4_scaffold_42094_4
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(2048..3916)
DNA (1869bp) protein (623aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02AW9_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ81797.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source=
13_1_40cm_4_scaffold_42094_5
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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4036..4464
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Aquifex aeolicus (strain VF5) RepID=O67941_AQUAE
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
hypothetical protein
13_1_40cm_4_scaffold_42094_6
R_NC10_66_22, NC10, Bacteria

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comp(4487..5920)
DNA (1434bp) protein (478aa)
Glu/Leu/Phe/Val dehydrogenase; K00261 glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Glu/Leu/Phe/Val dehydrogenase; K00261 glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] id=14428745 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin3_NC10 organism_group=NC10
Glu/Leu/Phe/Val dehydrogenase
13_1_40cm_4_scaffold_42094_trna_1
unknown

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6029..6103
DNA (75bp)
transferRNA
13_1_40cm_4_scaffold_42094_7
BJP_IG2158_Zixibacteria_48_33, Zixibacteria, Bacteria

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6376..7104
DNA (729bp) protein (243aa)
hypothetical protein id=16960850 bin=RBG_16_Aminicenantes_66_30 species=Eudoraea adriatica genus=Eudoraea taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein
Tax=BJP_IG2158_Zixibacteria_48_33
13_1_40cm_4_scaffold_42094_8
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7108..9366)
DNA (2259bp) protein (753aa)
Beta-carotene ketolase {ECO:0000313|EMBL:GAO55809.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
FAD dependent oxidoreductase id=14631624 bin=bin9_gal15 tax=bin9_gal15 organism_group=GAL15
FAD dependent oxidoreductase
13_1_40cm_4_scaffold_42094_9
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

comp(9457..10461)
DNA (1005bp) protein (335aa)
Proton/sodium-glutamate symport protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NF03_GLOVI
proton/sodium-glutamate symport protein
Proton/sodium-glutamate symport protein {ECO:0000313|EMBL:BAC91665.1}; TaxID=251221 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (stra
13_1_40cm_4_scaffold_42094_10
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

10993..11742
DNA (750bp) protein (250aa)
hypothetical protein; K07164 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
hypothetical protein; K07164 id=12556623 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
13_1_40cm_4_scaffold_42094_11
CSP1_5_NC10, NC10, Bacteria

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12475..13074
DNA (600bp) protein (200aa)
Alanine racemase domain protein id=4736520 bin=GWC2_Nitrospirae_57_13 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
yggS; hypothetical protein Tax=CSP1_5_NC10
hypothetical protein
13_1_40cm_4_scaffold_42094_12
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13075..13581
DNA (507bp) protein (169aa)
Cell-division initiation protein DivIVA n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MNL0_CORCM
cell-division initiation protein; K04074 cell division initiation protein Tax=RBG_13_Deltaproteobacteria_61_14_curated
divIVA; cell-division initiation protein DivIVA
13_1_40cm_4_scaffold_42094_13
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

13613..14932
DNA (1320bp) protein (440aa)
imidazolonepropionase; K01468 imidazolonepropionase [EC:3.5.2.7] id=24411077 bin=RBG_19FT_COMBO_GAL15_69_19 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
imidazolonepropionase; K01468 imidazolonepropionase [EC:3.5.2.7] Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
imidazolonepropionase
13_1_40cm_4_scaffold_42094_14
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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15207..15614
DNA (408bp) protein (136aa)
Formiminotransferase-cyclodeaminase n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8ML40_ALKOO
formiminotransferase-cyclodeaminase Tax=RBG_16_Euryarchaeota_68_12_curated
formiminotransferase-cyclodeaminase
13_1_40cm_4_scaffold_42094_15
unknown

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comp(15927..16961)
DNA (1035bp) protein (345aa)

This feature has no annotations

13_1_40cm_4_scaffold_42094_16
unknown

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16963..19398
DNA (2436bp) protein (812aa)

This feature has no annotations

Displaying 17 items

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