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13_1_40cm_4_scaffold_4253

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_4253_1
unknown

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1..201
DNA (201bp) protein (67aa)

This feature has no annotations

13_1_40cm_4_scaffold_4253_2
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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179..952
DNA (774bp) protein (258aa)
ABC transporter related protein n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8UZA8_TERSS
ABC transporter-like protein
ABC transporter related protein {ECO:0000313|EMBL:ADV82126.1}; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanensis (strain
13_1_40cm_4_scaffold_4253_3
R_Acidobacteria_67_21, Acidobacteria, Bacteria

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1014..2474
DNA (1461bp) protein (487aa)
rpoN; RNA polymerase sigma-54 factor RpoN; K03092 RNA polymerase sigma-54 factor Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
sigma-54 (RpoN); K03092 RNA polymerase sigma-54 factor id=12554063 bin=CNBR_ACIDO species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
rpoN; RNA polymerase sigma-54 factor RpoN
13_1_40cm_4_scaffold_4253_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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2506..3063
DNA (558bp) protein (186aa)
Ribosomal subunit interface protein n=1 Tax=Desulfurispirillum indicum (strain ATCC BAA-1389 / S5) RepID=E6W109_DESIS
Ribosomal subunit interface protein {ECO:0000313|EMBL:CDM66192.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
ribosomal subunit interface protein
13_1_40cm_4_scaffold_4253_5
GWC2_Deltaproteobacteria_65_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3068..4213
DNA (1146bp) protein (382aa)
acyl-CoA dehydrogenase domain-containing protein; K00248 butyryl-CoA dehydrogenase [EC:1.3.8.1] Tax=GWC2_Deltaproteobacteria_65_14_curated
Acyl-CoA dehydrogenase domain protein id=3661231 bin=GWC2_Proteo_65_14_Ab886 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
acyl-CoA dehydrogenase domain-containing protein
13_1_40cm_4_scaffold_4253_6
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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4215..5906
DNA (1692bp) protein (564aa)
methylmalonyl-CoA mutase; K01848 methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] Tax=RBG_13_Deltaproteobacteria_61_14_curated
methylmalonyl-CoA mutase (EC:5.4.99.2)
Methylmalonyl-CoA mutase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGL4_CHLTF
13_1_40cm_4_scaffold_4253_7
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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5908..6318
DNA (411bp) protein (137aa)
methylmalonyl-CoA mutase-like protein; K01849 methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] id=14425886 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
methylmalonyl-CoA mutase-like protein; K01849 methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] Tax=CSP1_2_Dadabacteria
cobalamin B12-binding domain-containing protein
13_1_40cm_4_scaffold_4253_8
unknown

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6365..6751
DNA (387bp) protein (129aa)

This feature has no annotations

13_1_40cm_4_scaffold_4253_9
Desulfovibrio gigas, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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6748..7275
DNA (528bp) protein (176aa)
Putative CheW protein {ECO:0000313|EMBL:AGW14953.1}; TaxID=1121448 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibr
putative CheW protein
13_1_40cm_4_scaffold_4253_10
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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7272..8435
DNA (1164bp) protein (388aa)
Response regulator n=3 Tax=Myxococcus xanthus RepID=Q1D3Z1_MYXXD
response regulator
Response regulator {ECO:0000313|EMBL:ABF93104.1}; TaxID=246197 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus x
13_1_40cm_4_scaffold_4253_11
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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8719..10980
DNA (2262bp) protein (754aa)
valyl-tRNA synthetase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9] Tax=RBG_13_Deltaproteobacteria_58_19_curated
valyl-tRNA synthase n=1 Tax=Thermodesulfatator atlanticus RepID=UPI0003B4B576
valS; valyl-tRNA synthetase
Displaying 11 items

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