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13_1_40cm_4_scaffold_7760

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Displaying 15 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_7760_1
unknown

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comp(3..413)
DNA (411bp) protein (137aa)

This feature has no annotations

13_1_40cm_4_scaffold_7760_2
RLO_Entotheonella_69_37, Entotheonella, Bacteria

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524..955
DNA (432bp) protein (144aa)
hypothetical protein; K05524 ferredoxin Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
4Fe-4S ferredoxin, iron-sulfur binding domain protein id=2313762 bin=GWA2_Elusimicrobia_66_18 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
Ferredoxin-2
13_1_40cm_4_scaffold_7760_3
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

1200..1994
DNA (795bp) protein (265aa)
7-cyano-7-deazaguanine synthase {ECO:0000256|SAAS:SAAS00029421}; EC=6.3.4.20 {ECO:0000256|SAAS:SAAS00029421};; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="unculture
Queuosine biosynthesis protein QueC n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SFX4_9BACT
PP-loop superfamily ATPase
13_1_40cm_4_scaffold_7760_4
unknown

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comp(1877..2644)
DNA (768bp) protein (256aa)

This feature has no annotations

13_1_40cm_4_scaffold_7760_5
RLO_Omnitrophica_50_11, Omnitrophica, Bacteria

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comp(2672..3085)
DNA (414bp) protein (138aa)
preQ(0) biosynthesis protein QueD; K01737 6-pyruvoyl tetrahydrobiopterin synthase [EC:4.2.3.12] Tax=RIFCSPLOWO2_12_FULL_Omnitrophica_50_11_curated
6-pyruvoyl tetrahydrobiopterin synthase n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B5EA6F
6-pyruvoyl-tetrahydropterin synthase
13_1_40cm_4_scaffold_7760_6
unknown

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comp(3122..3370)
DNA (249bp) protein (83aa)

This feature has no annotations

13_1_40cm_4_scaffold_7760_7
RLO_PLX_64_10, Bacteria

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4162..5070
DNA (909bp) protein (303aa)
Radical SAM domain protein id=1742856 bin=GWD2_Deltaproteobacteria_55_8 species=Pirellula staleyi genus=Pirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
radical SAM domain-containing protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
radical SAM domain-containing protein
13_1_40cm_4_scaffold_7760_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(5097..6230)
DNA (1134bp) protein (378aa)
Putative hydrolase n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1DD75_MYXXD
Predicted membrane-bound metal-dependent hydrolase {ECO:0000313|EMBL:CDM65558.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methyla
hydrolase
13_1_40cm_4_scaffold_7760_9
Tumebacillus flagellatus, Tumebacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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6259..7320
DNA (1062bp) protein (354aa)
Uncharacterized protein {ECO:0000313|EMBL:KEO82426.1}; TaxID=1157490 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Tumebacillus.;" source="Tumebacillus flagellatus.;"
YdjC id=2262036 bin=GWB2_Chloroflexi_54_36 species=Bacillus cereus genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
hypothetical protein
13_1_40cm_4_scaffold_7760_10
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(7317..9104)
DNA (1788bp) protein (596aa)
carbon starvation protein CstA; K06200 carbon starvation protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
carbon starvation protein CstA; K06200 carbon starvation protein id=14426070 bin=bin1_lowGC species=Desulfotomaculum nigrificans genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
cstA-1; carbon starvation protein CstA
13_1_40cm_4_scaffold_7760_11
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9190..10998
DNA (1809bp) protein (603aa)
crotonase (EC:4.2.1.17)
Crotonase {ECO:0000313|EMBL:AGP34390.1}; EC=4.2.1.17 {ECO:0000313|EMBL:AGP34390.1};; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; So
Crotonase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XRA8_SORCE
13_1_40cm_4_scaffold_7760_12
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10959..12257
DNA (1299bp) protein (433aa)
Benzoyl-CoA oxygenase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XPE9_SORCE
benzoyl-CoA oxygenase
Benzoyl-CoA oxygenase {ECO:0000313|EMBL:AGP34389.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cel
13_1_40cm_4_scaffold_7760_13
RBG_19FT_COMBO_Aminicenantes_58_17_curated, Aminicenantes, Bacteria

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comp(12309..13325)
DNA (1017bp) protein (339aa)
hypothetical protein id=24471605 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein Tax=RBG_19FT_COMBO_Aminicenantes_58_17_curated
RDD domain-containing protein
13_1_40cm_4_scaffold_7760_14
unknown

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comp(13337..13909)
DNA (573bp) protein (191aa)

This feature has no annotations

13_1_40cm_4_scaffold_7760_15
Paenibacillus sp. MSt1, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13906..14394)
DNA (489bp) protein (163aa)
RNA polymerase sigma factor n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XX72_9BACT
RNA polymerase sigma70 factor {ECO:0000313|EMBL:KEQ24557.1}; TaxID=1501230 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. MSt1.;"
RNA polymerase sigma-E factor
Displaying 15 items

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