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13_1_40cm_4_scaffold_1081

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Displaying items 1-30 of 35 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1081_1
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..314)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IA34_METNO
hypothetical protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
hypothetical protein
13_1_40cm_4_scaffold_1081_2
RBG_13_Chloroflexi_53_26_curated, Chloroflexi, Bacteria

Not on your lists

comp(497..1963)
DNA (1467bp) protein (489aa)
alpha,alpha-trehalose-phosphate synthase (EC:2.4.1.15); K00697 trehalose 6-phosphate synthase [EC:2.4.1.15] Tax=RBG_13_Chloroflexi_53_26_curated
Alpha,alpha-trehalose-phosphate synthase (UDP-forming) n=1 Tax=Desulfovibrio africanus str. Walvis Bay RepID=F3Z2Z7_DESAF
alpha,alpha-trehalose-phosphate synthase
13_1_40cm_4_scaffold_1081_3
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1960..2757)
DNA (798bp) protein (266aa)
trehalose-phosphatase; K01087 trehalose 6-phosphate phosphatase [EC:3.1.3.12] Tax=RBG_13_Deltaproteobacteria_61_14_curated
hypothetical protein n=1 Tax=BRC1 bacterium SCGC AAA252-M09 RepID=UPI000378C1C4
trehalose-phosphatase
13_1_40cm_4_scaffold_1081_4
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(2977..3627)
DNA (651bp) protein (217aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01NC6_SOLUE
LuxR family transcriptional regulator
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ABJ82594.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.
13_1_40cm_4_scaffold_1081_5
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(3624..4958)
DNA (1335bp) protein (445aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003660F96
integral membrane sensor signal transduction histidine kinase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
integral membrane sensor signal transduction histidine kinase
13_1_40cm_4_scaffold_1081_6
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(5089..5889)
DNA (801bp) protein (267aa)
hypothetical protein n=1 Tax=Methylomonas sp. MK1 RepID=UPI00037C4950
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
hypothetical protein
13_1_40cm_4_scaffold_1081_7
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(5893..6291)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9WAQ4_9SPHN
Uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
hypothetical protein
13_1_40cm_4_scaffold_1081_8
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(6316..6978)
DNA (663bp) protein (221aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INP6_KORVE
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
hypothetical protein
13_1_40cm_4_scaffold_1081_9
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

7048..8358
DNA (1311bp) protein (437aa)
Uncharacterized protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZRK7_9BACT
hypothetical protein
Uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
13_1_40cm_4_scaffold_1081_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

8513..9532
DNA (1020bp) protein (340aa)
PepSY-associated TM helix domain protein n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NX64_GRAMM
PepSY-associated TM helix domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PepSY-associated TM helix domain-containing protein
13_1_40cm_4_scaffold_1081_11
RBG_16_Chloroflexi_58_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(9477..10601)
DNA (1125bp) protein (375aa)
cystathionine gamma-lyase (EC:4.4.1.1); K01758 cystathionine gamma-lyase [EC:4.4.1.1] Tax=RBG_16_Chloroflexi_58_14_curated
cystathionine gamma-lyase (EC:4.4.1.1)
cystathionine gamma-lyase n=1 Tax=Streptomyces sp. CcalMP-8W RepID=UPI000374ED24
13_1_40cm_4_scaffold_1081_12
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10629..11720)
DNA (1092bp) protein (364aa)
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI0003464020
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHH96284.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
13_1_40cm_4_scaffold_1081_13
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(11748..11990)
DNA (243bp) protein (81aa)
Cytochrome c, class I n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024M9_SOLUE
class I cytochrome c Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
class I cytochrome c
13_1_40cm_4_scaffold_1081_14
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(12279..12908)
DNA (630bp) protein (210aa)
NADH dehydrogenase subunit I (EC:1.6.5.3); K00338 NADH-quinone oxidoreductase subunit I [EC:1.6.5.3] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
NADH dehydrogenase subunit I (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit I n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B6348D
13_1_40cm_4_scaffold_1081_15
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(12908..13999)
DNA (1092bp) protein (364aa)
NADH dehydrogenase (quinone) (EC:1.6.99.5); K00337 NADH-quinone oxidoreductase subunit H [EC:1.6.5.3] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
NADH dehydrogenase (quinone) (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit H id=2999337 bin=GWA2_OP3_52_12 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
13_1_40cm_4_scaffold_1081_16
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(14043..15650)
DNA (1608bp) protein (536aa)
Molybdopterin oxidoreductase Fe4S4 region Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
NADH dehydrogenase I, G subunit (75 kDa) id=3990316 bin=GWC2_Methylomirabilis_70_16 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Molybdopterin oxidoreductase Fe4S4 region
13_1_40cm_4_scaffold_1081_17
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(15638..17455)
DNA (1818bp) protein (606aa)
NADH-quinone oxidoreductase subunit F n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B34E5F
nuoF; NADH-quinone oxidoreductase chain F Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
nuoF; NADH-quinone oxidoreductase chain F
13_1_40cm_4_scaffold_1081_18
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(17489..18859)
DNA (1371bp) protein (457aa)
nuoD; NADH dehydrogenase I subunit D; K00333 NADH-quinone oxidoreductase subunit D [EC:1.6.5.3] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
NADH dehydrogenase I subunit D (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit D id=2999356 bin=GWA2_OP3_52_12 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
13_1_40cm_4_scaffold_1081_19
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(18862..19443)
DNA (582bp) protein (194aa)
NADH (or F420H2) dehydrogenase subunit C (EC:1.6.5.3); K00332 NADH-quinone oxidoreductase subunit C [EC:1.6.5.3] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
nuoC1; NADH dehydrogenase (ubiquinone) (EC:1.6.5.3); K00332 NADH-quinone oxidoreductase subunit C [EC:1.6.5.3] id=14627531 bin=bin7_NC10_sister species=Nitrospina sp. SCGC AAA288-L16 genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=bin7_NC10_sister organism_group=NC10
NADH (or F420H2) dehydrogenase subunit C (EC:1.6.5.3)
13_1_40cm_4_scaffold_1081_20
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(19440..19949)
DNA (510bp) protein (170aa)
NADH dehydrogenase subunit B (EC:1.6.99.5); K00331 NADH-quinone oxidoreductase subunit B [EC:1.6.5.3] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
NADH dehydrogenase subunit B (EC:1.6.99.5); K00331 NADH-quinone oxidoreductase subunit B [EC:1.6.5.3] id=14627530 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Omnitrophica tax=bin7_NC10_sister organism_group=NC10
NADH dehydrogenase subunit B (EC:1.6.99.3)
13_1_40cm_4_scaffold_1081_21
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(19954..20418)
DNA (465bp) protein (155aa)
NADH-ubiquinone/plastoquinone oxidoreductase chain 3; K00330 NADH-quinone oxidoreductase subunit A [EC:1.6.5.3] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
NADH:ubiquinone oxidoreductase subunit A n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B54E6D
NADH-ubiquinone/plastoquinone oxidoreductase chain 3
13_1_40cm_4_scaffold_1081_22
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20678..21118)
DNA (441bp) protein (147aa)
PilT protein domain protein n=2 Tax=Chloroflexus RepID=A9WFW2_CHLAA
PilT protein domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PilT domain-containing protein
13_1_40cm_4_scaffold_1081_23
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

21311..22297
DNA (987bp) protein (329aa)
acetamidase n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B76DFA
putative hydrolase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
acetamidase/formamidase
13_1_40cm_4_scaffold_1081_24
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

22368..22640
DNA (273bp) protein (91aa)
id=3914666 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
id=3914666 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_4_scaffold_1081_25
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

22637..23053
DNA (417bp) protein (139aa)
id=3914667 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
id=3914667 Tax=GWC2_Rokubacteria_70_16_curated
13_1_40cm_4_scaffold_1081_26
Candidatus Acetothermus autotrophicum, Candidatus Acetothermum, Acetothermia, Bacteria

Not on your lists

23171..24277
DNA (1107bp) protein (369aa)
NAD(P)(+) transhydrogenase (AB-specific) (EC:1.6.1.2)
NAD(P) transhydrogenase subunit alpha n=1 Tax=Anabaena sp. PCC 7108 RepID=UPI000349A8FA
NAD(P) transhydrogenase subunit alpha {ECO:0000313|EMBL:BAL59350.1}; TaxID=1446466 species="Bacteria; Acetothermia; Candidatus Acetothermum.;" source="Candidatus Acetothermus autotrophicum.;"
13_1_40cm_4_scaffold_1081_27
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(24319..25722)
DNA (1404bp) protein (468aa)
NAD(P) transhydrogenase, beta subunit; K00325 NAD(P) transhydrogenase subunit beta [EC:1.6.1.2] Tax=RBG_16_Acidobacteria_70_10_curated
NAD(P) transhydrogenase subunit beta id=4381502 bin=GWC2_Ignavibacteria_56_12 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
NAD(P) transhydrogenase subunit beta
13_1_40cm_4_scaffold_1081_28
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(25722..26132)
DNA (411bp) protein (137aa)
nicotinamide nucleotide transhydrogenase subunit alpha; K00324 NAD(P) transhydrogenase subunit alpha [EC:1.6.1.2] Tax=RBG_16_Ignavibacteria_34_14_curated
Nicotinamide nucleotide transhydrogenase, subunit alpha id=4913309 bin=GWA2_Ignavibacteria_55_11 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
nicotinamide nucleotide transhydrogenase subunit alpha
13_1_40cm_4_scaffold_1081_29
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

comp(26273..27673)
DNA (1401bp) protein (467aa)
proton-translocating NADH-quinone oxidoreductase subunit N (EC:1.6.99.5); K00343 NADH-quinone oxidoreductase subunit N [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
nuoN2; NADH-quinone oxidoreductase subunit N 2 (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit N id=3426635 bin=GWF2_Nitrospirae_44_13 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
13_1_40cm_4_scaffold_1081_30
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

comp(27670..29139)
DNA (1470bp) protein (490aa)
proton-translocating NADH-quinone oxidoreductase subunit M (EC:1.6.99.5); K00342 NADH-quinone oxidoreductase subunit M [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
nuoM; NADH-quinone oxidoreductase membrane subunit M (EC:1.6.99.5)
hypothetical protein n=2 Tax=Bacteria RepID=UPI00036E574F
Displaying items 1-30 of 35 in total

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