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13_1_40cm_4_scaffold_1929

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Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1929_1

Not on your lists

comp(2..2008)
DNA (2007bp) protein (669aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN71688.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein id=24445683 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein
13_1_40cm_4_scaffold_1929_2
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

2267..2941
DNA (675bp) protein (225aa)
ABC transporter; K02003 putative ABC transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Putative ABC transporter ATP-binding protein id=4329433 bin=GWC2_Nitrospirae-rel_56_14 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
ABC transporter
13_1_40cm_4_scaffold_1929_3
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

2938..3237
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M8B2_GEODF
hypothetical protein; K02004 putative ABC transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein
13_1_40cm_4_scaffold_1929_4
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

3245..5434
DNA (2190bp) protein (730aa)
Putative uncharacterized protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GEJ8_GEOUR
hypothetical protein; K02004 putative ABC transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein
13_1_40cm_4_scaffold_1929_5
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

5427..6179
DNA (753bp) protein (251aa)
Putative uncharacterized protein n=1 Tax=Geobacter sp. (strain M18) RepID=E8WSL2_GEOS8
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein
13_1_40cm_4_scaffold_1929_6
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

6221..7426
DNA (1206bp) protein (402aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
13_1_40cm_4_scaffold_1929_7
unknown

Not on your lists

7452..7745
DNA (294bp) protein (98aa)

This feature has no annotations

13_1_40cm_4_scaffold_1929_8
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

7735..8016
DNA (282bp) protein (94aa)
gatC; glutamyl-tRNA(Gln) amidotransferase subunit C (EC:6.3.5.-); K02435 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_5
gatC; glutamyl-tRNA(Gln) amidotransferase, C subunit (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C id=4178835 bin=GWA2_Ignavibacteria_55_11 species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
13_1_40cm_4_scaffold_1929_9
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

8013..9455
DNA (1443bp) protein (481aa)
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A (EC:6.3.5.-); K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] Tax=RIFCSPLOWO2_12_FULL_Acidobacteri
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A (EC:6.3.5.-)
glutamyl-tRNA(Gln) amidotransferase n=1 Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI000361E3E8
13_1_40cm_4_scaffold_1929_10
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

9486..10151
DNA (666bp) protein (222aa)
Outer membrane chaperone Skp (OmpH) n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01SH7_SOLUE
outer membrane chaperone Skp; K06142 outer membrane protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
outer membrane chaperone Skp
13_1_40cm_4_scaffold_1929_11
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(10154..10450)
DNA (297bp) protein (99aa)
id=12554195 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
13_1_40cm_4_scaffold_1929_12
Smithella sp. ME-1, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10454..11908)
DNA (1455bp) protein (485aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000256|SAAS:SAAS00222465}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.-
gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Smithella sp. ME-1 RepID=V4FHB2_9DELT
13_1_40cm_4_scaffold_1929_13
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(11922..13319)
DNA (1398bp) protein (466aa)
Cobyrinic acid A,C-diamide synthase n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NS98_GRAMM
cobyrinic acid A,C-diamide synthase
Cobyrinic acid A,C-diamide synthase {ECO:0000256|HAMAP-Rule:MF_00027}; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensi
13_1_40cm_4_scaffold_1929_14
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

13339..14382
DNA (1044bp) protein (348aa)
Methylthioribose-1-phosphate isomerase {ECO:0000255|HAMAP-Rule:MF_01678}; Short=M1Pi {ECO:0000255|HAMAP-Rule:MF_01678};; Short=MTR-1-P isomerase {ECO:0000255|HAMAP-Rule:MF_01678};; EC=5.3.1.23 {ECO:00
Methylthioribose-1-phosphate isomerase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=MTNA_KORVE
translation initiation factor 2B subunit I
13_1_40cm_4_scaffold_1929_15
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists


14382..15443
DNA (1062bp) protein (354aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00195365}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-th
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=TSAD_KORVE
DNA-binding/iron metalloprotein/AP endonuclease
13_1_40cm_4_scaffold_1929_16
unknown

Not on your lists

15619..15933
DNA (315bp) protein (105aa)

This feature has no annotations

13_1_40cm_4_scaffold_1929_17
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(16006..16566)
DNA (561bp) protein (187aa)
Ribosome-recycling factor n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IV34_KORVE
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=454194 species="Bacteria;
ribosome recycling factor
13_1_40cm_4_scaffold_1929_18
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16595..17305)
DNA (711bp) protein (237aa)
pyrH; uridylate kinase; K09903 uridylate kinase [EC:2.7.4.22] Tax=RBG_13_Deltaproteobacteria_47_9_curated
Uridylate kinase id=8266233 bin=CD_OP8_4m species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
pyrH; uridylate kinase
13_1_40cm_4_scaffold_1929_19
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists


comp(18177..18995)
DNA (819bp) protein (273aa)
30S ribosomal protein S2 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=RS2_KORVE
rpsB; 30S ribosomal protein S2
30S ribosomal protein S2 {ECO:0000255|HAMAP-Rule:MF_00291}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (
13_1_40cm_4_scaffold_1929_20
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists


comp(19138..19476)
DNA (339bp) protein (113aa)
30S ribosomal protein S9 n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGN9_CHLTF
30S ribosomal protein S9
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Ch
13_1_40cm_4_scaffold_1929_21
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists


comp(19527..20003)
DNA (477bp) protein (159aa)
50S ribosomal protein L13 n=1 Tax=Thermotoga naphthophila (strain ATCC BAA-489 / DSM 13996 / JCM 10882 / RKU-10) RepID=D2C3Y8_THENR
rplM; 50S ribosomal protein L13; K02871 large subunit ribosomal protein L13 Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
50S ribosomal protein L13
13_1_40cm_4_scaffold_1929_22
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

20025..21386
DNA (1362bp) protein (454aa)
Peptidase A2A n=1 Tax=Asticcacaulis biprosthecum C19 RepID=F4QTX2_9CAUL
peptidase S1 and S6 chymotrypsin/Hap; K12600 superkiller protein 3 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein
13_1_40cm_4_scaffold_1929_23
unknown

Not on your lists

21796..22215
DNA (420bp) protein (140aa)

This feature has no annotations

13_1_40cm_4_scaffold_1929_24
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

22240..23136
DNA (897bp) protein (299aa)
N-acetylmuramic acid 6-phosphate etherase {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795}; Short=MurNAc-6-P etherase {ECO:0000256|HAMAP-Rule:MF_00068};; EC=4.2.1.126 {ECO:0000256|HAMA
N-acetylmuramic acid 6-phosphate etherase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IND2_KORVE
murQ; N-acetylmuramic acid 6-phosphate etherase
13_1_40cm_4_scaffold_1929_25
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

23209..24315
DNA (1107bp) protein (369aa)
N-acetylglucosamine 6-phosphate deacetylase; K01443 N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IMW9_KORVE
N-acetylglucosamine 6-phosphate deacetylase
13_1_40cm_4_scaffold_1929_26
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

24303..25559
DNA (1257bp) protein (419aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; K00790 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] Tax=RBG_16_Acidobacteria_70_10_curated
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=MURA_KORVE
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
13_1_40cm_4_scaffold_1929_27
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

25856..26851
DNA (996bp) protein (332aa)
bcpA; carboxyvinyl-carboxyphosphonate phosphorylmutase (EC:2.7.8.23); K01003 carboxyvinyl-carboxyphosphonate phosphorylmutase [EC:2.7.8.23] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
carboxyvinyl-carboxyphosphonate phosphorylmutase n=1 Tax=Rhodococcus opacus RepID=UPI00029CCA4F
2,3-dimethylmalate lyase
13_1_40cm_4_scaffold_1929_28
Chlorobium limicola, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

27557..28330
DNA (774bp) protein (258aa)
Transposase IS4 family protein n=1 Tax=Chlorobium limicola (strain DSM 245 / NBRC 103803) RepID=B3EDJ7_CHLL2
transposase IS4 family protein
Transposase IS4 family protein {ECO:0000313|EMBL:ACD90622.1}; TaxID=290315 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlo
13_1_40cm_4_scaffold_1929_29
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

28473..30017
DNA (1545bp) protein (515aa)
Tnp n=1 Tax=Aquincola tertiaricarbonis RepID=M4PPA0_9BURK
hypothetical protein Tax=GWA2_Elusimicrobia_69_24_curated
insE; transposase InsE
Displaying 29 items

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