ggKbase home page

13_1_40cm_4_scaffold_16157

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_16157_1
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists


comp(1..489)
DNA (489bp) protein (163aa)
50S ribosomal protein L10e n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7T9E8_9EURY
rpl10e; 50S ribosomal protein L10AE; K02866 large subunit ribosomal protein L10e Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
50S ribosomal protein L10
13_1_40cm_4_scaffold_16157_2
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(534..2012)
DNA (1479bp) protein (493aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6Q3W7_9ZZZZ
BNR/Asp-box repeat-containing protein Tax=RBG_16_Euryarchaeota_68_12_curated
BNR/Asp-box repeat-containing protein
13_1_40cm_4_scaffold_16157_3
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

2191..2967
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000365E8E8
putative archaeal kinase Tax=RBG_16_Euryarchaeota_68_12_curated
putative archaeal kinase
13_1_40cm_4_scaffold_16157_4
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

3011..4039
DNA (1029bp) protein (343aa)
Isopentenyl-diphosphate delta-isomerase, FMN-dependent n=2 Tax=mine drainage metagenome RepID=T1BSF2_9ZZZZ
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_1_40cm_4_scaffold_16157_5
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

4553..5122
DNA (570bp) protein (190aa)
Bifunctional short chain isoprenyl diphosphate synthase; K13787 geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Geranylgeranyl pyrophosphate synthase id=3817391 bin=GWA2_Ignavibacteria_55_11 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
geranylgeranyl pyrophosphate synthetase
13_1_40cm_4_scaffold_16157_6
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(5119..5787)
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037AEB38
radB; DNA repair and recombination protein RadB Tax=RBG_16_Euryarchaeota_67_27_curated
radB; DNA repair and recombination protein RadB
13_1_40cm_4_scaffold_16157_7
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

6423..9536
DNA (3114bp) protein (1038aa)
FG-GAP repeat protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W783_DYAFD
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
FG-GAP repeat-containing protein
Displaying 7 items

View Taxonomy