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13_1_40cm_4_scaffold_24739

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Displaying 26 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_24739_1
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(248..697)
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037A8B95
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein
13_1_40cm_4_scaffold_24739_2
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

803..961
DNA (159bp) protein (53aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_40cm_4_scaffold_24739_trna_2
unknown

Not on your lists

comp(1035..1106)
DNA (72bp)
transferRNA
13_1_40cm_4_scaffold_24739_3
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

1241..2458
DNA (1218bp) protein (406aa)
cysteinyl-tRNA synthetase; K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Cysteine--tRNA ligase n=1 Tax=Thermococcus sp. AM4 RepID=B7R1M2_9EURY
cysteinyl-tRNA synthetase
13_1_40cm_4_scaffold_24739_4
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists


2544..2975
DNA (432bp) protein (144aa)
30S ribosomal protein S6e n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IAM9_ACIB4
ribosomal protein S6e; K02991 small subunit ribosomal protein S6e Tax=RBG_16_Euryarchaeota_67_27_curated
ribosomal protein S6e
13_1_40cm_4_scaffold_24739_5
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists


2972..4204
DNA (1233bp) protein (411aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036DC8F0
translation initiation factor IF-2 subunit gamma Tax=RBG_16_Euryarchaeota_67_27_curated
translation initiation factor 2 subunit gamma
13_1_40cm_4_scaffold_24739_6
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(4248..4550)
DNA (303bp) protein (101aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_4_scaffold_24739_7
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists


4721..5770
DNA (1050bp) protein (350aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003662022
putative cell division protein Tax=RBG_16_Euryarchaeota_67_27_curated
putative cell division protein
13_1_40cm_4_scaffold_24739_8
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

5815..6684
DNA (870bp) protein (290aa)
proline-specific peptidase; K01259 proline iminopeptidase [EC:3.4.11.5] Tax=RBG_16_Archaea_50_20_curated
Proline-specific peptidase n=1 Tax=mine drainage metagenome RepID=T0ZMM1_9ZZZZ
peptidase
13_1_40cm_4_scaffold_24739_9
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(6718..7290)
DNA (573bp) protein (191aa)
UPF0215 protein MBGDN05_00652 n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7T434_9EURY
hypothetical protein; K09120 hypothetical protein Tax=RBG_16_Euryarchaeota_67_27_curated
hypothetical protein
13_1_40cm_4_scaffold_24739_10
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(7291..7644)
DNA (354bp) protein (118aa)
peptidyl-tRNA hydrolase; K04794 peptidyl-tRNA hydrolase, PTH2 family [EC:3.1.1.29] Tax=RBG_16_Euryarchaeota_68_13_curated
peptidyl-tRNA hydrolase (EC:3.1.1.29)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036AECD9
13_1_40cm_4_scaffold_24739_11
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(7647..8264)
DNA (618bp) protein (206aa)
Putative uncharacterized protein n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5ICL4_ACIB4
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_1_40cm_4_scaffold_24739_12
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

9064..9846
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000380433D
RecA-superfamily ATPase possibly involved in signal transduction Tax=RBG_16_Euryarchaeota_68_13_curated
RecA-superfamily ATPase possibly involved in signal transduction
13_1_40cm_4_scaffold_24739_13
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

9843..10907
DNA (1065bp) protein (355aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UM36_ANASK
two component sigma54 specific Fis family transcriptional regulator Tax=RBG_16_Euryarchaeota_67_27_curated
sigma-54 dependent DNA-binding response regulator Nla24
13_1_40cm_4_scaffold_24739_14
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

11013..11414
DNA (402bp) protein (134aa)
Two component transcriptional regulator, Fis family n=3 Tax=Anaeromyxobacter RepID=B4UDR6_ANASK
Fis family two component sigma-54 specific transcriptional regulator; K02667 two-component system, NtrC family, response regulator PilR Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
two component Fis family transcriptional regulator
13_1_40cm_4_scaffold_24739_15
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

11418..11786
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00035F63A8
hypothetical protein Tax=RBG_16_Euryarchaeota_67_27_curated
hypothetical protein
13_1_40cm_4_scaffold_24739_16
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

11817..12155
DNA (339bp) protein (113aa)
hypothetical protein Tax=RBG_16_Euryarchaeota_67_27_curated
Uncharacterized protein id=4880920 bin=GWC2_Pelobacter_58_13 species=Blastopirellula marina genus=Blastopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
13_1_40cm_4_scaffold_24739_17
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(12263..12682)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XQC2_METZD
hypothetical protein; K07502 hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_1_40cm_4_scaffold_24739_18
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

13062..15017
DNA (1956bp) protein (652aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037EA70C
7-cyano-7-deazaguanine tRNA-ribosyltransferase Tax=RBG_16_Euryarchaeota_67_27_curated
7-cyano-7-deazaguanine tRNA-ribosyltransferase
13_1_40cm_4_scaffold_24739_19
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(14950..15315)
DNA (366bp) protein (122aa)
hypothetical protein
Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_40cm_4_scaffold_24739_trna_1
unknown

Not on your lists

comp(15212..15284)
DNA (73bp)
transferRNA
13_1_40cm_4_scaffold_24739_20
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(15312..16616)
DNA (1305bp) protein (435aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003821D54
2-methylthioadenine synthetase Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
2-methylthioadenine synthetase
13_1_40cm_4_scaffold_24739_21
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

16692..16943
DNA (252bp) protein (84aa)
Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_40cm_4_scaffold_24739_22
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(16940..17086)
DNA (147bp) protein (49aa)
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_40cm_4_scaffold_24739_23
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

17192..17770
DNA (579bp) protein (193aa)
O-methyltransferase family 3 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CZM1_PSEUX
O-methyltransferase Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
O-methyltransferase protein
13_1_40cm_4_scaffold_24739_24
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

17835..18881
DNA (1047bp) protein (349aa)
D-alpha,beta-D-heptose 1,7-bisphosphate phosphatase (EC:3.1.3.-); K03273 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Hypothetical conserved protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SRJ2_9BACT
histidinol-phosphate phosphatase family protein
Displaying 26 items

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