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13_1_40cm_4_scaffold_3484

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Displaying 24 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_3484_1
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(3..515)
DNA (513bp) protein (171aa)
exodeoxyribonuclease VII large subunit; K03601 exodeoxyribonuclease VII large subunit [EC:3.1.11.6] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
exodeoxyribonuclease VII large subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit n=1 Tax=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) RepID=D5SPQ0_PLAL2
13_1_40cm_4_scaffold_3484_2
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(1329..1889)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T4Y9_9EURY
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_1_40cm_4_scaffold_3484_3
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(2013..2240)
DNA (228bp) protein (76aa)
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_40cm_4_scaffold_3484_4
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

2388..3089
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000380433D
RecA-superfamily ATPase possibly involved in signal transduction Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RecA-superfamily ATPase possibly involved in signal transduction
13_1_40cm_4_scaffold_3484_5
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(3081..3851)
DNA (771bp) protein (257aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_40cm_4_scaffold_3484_6
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

4000..4719
DNA (720bp) protein (240aa)
Circadian clock protein, KaiC n=1 Tax=mine drainage metagenome RepID=T1C6X0_9ZZZZ
RecA-superfamily ATPase possibly involved in signal transduction Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RecA-superfamily ATPase possibly involved in signal transduction
13_1_40cm_4_scaffold_3484_7
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(4725..5690)
DNA (966bp) protein (322aa)
Cation transport ATPase n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7U082_9EURY
hypothetical protein Tax=RBG_16_Euryarchaeota_67_27_curated
uncharacterized LOC100255898
13_1_40cm_4_scaffold_3484_8
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

5714..6199
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Methanofollis liminatans DSM 4140 RepID=J0S2P2_9EURY
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_1_40cm_4_scaffold_3484_9
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

6772..7653
DNA (882bp) protein (294aa)
Circadian clock protein, KaiC n=1 Tax=mine drainage metagenome RepID=T1C6X0_9ZZZZ
circadian clock protein, KaiC Tax=RBG_16_Euryarchaeota_68_13_curated
RecA-superfamily ATPase possibly involved in signal transduction
13_1_40cm_4_scaffold_3484_10
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(7657..8040)
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00035FAAE2
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_1_40cm_4_scaffold_3484_11
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

8230..9174
DNA (945bp) protein (315aa)
Thioredoxin reductase (EC:1.8.1.9) Tax=RBG_16_Euryarchaeota_67_27_curated
Thioredoxin reductase (EC:1.8.1.9)
Ferredoxin--NADP reductase n=1 Tax=Candidatus Methanomethylophilus alvus Mx1201 RepID=M9SEK5_9EURY
13_1_40cm_4_scaffold_3484_12
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(9152..9817)
DNA (666bp) protein (222aa)
HAD-superfamily hydrolase, subfamily IA, variant 1 n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8J986_ANAD2
haloacid dehalogenase domain-containing protein hydrolase Tax=RBG_16_Euryarchaeota_67_27_curated
HAD superfamily hydrolase
13_1_40cm_4_scaffold_3484_13
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists


comp(9819..10319)
DNA (501bp) protein (167aa)
Putative RNA-binding protein (Contains PUA domain) n=1 Tax=Thermoplasmatales archaeon BRNA1 RepID=M4YM84_9EURY
putative RNA-binding protein (contains PUA domain) Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
putative RNA-binding protein (contains PUA domain)
13_1_40cm_4_scaffold_3484_14
unknown

Not on your lists

10415..11131
DNA (717bp) protein (239aa)

This feature has no annotations

13_1_40cm_4_scaffold_3484_15
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(11082..12500)
DNA (1419bp) protein (473aa)
hypothetical protein n=1 Tax=Geitlerinema sp. PCC 7105 RepID=UPI000379A828
hypothetical protein; K12600 superkiller protein 3 Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
putative membrane protein, containing TPR repeats
13_1_40cm_4_scaffold_3484_16
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

12638..13705
DNA (1068bp) protein (356aa)
egsA; NAD(P)-dependent glycerol-1-phosphate dehydrogenase (EC:1.1.1.261); K00096 glycerol-1-phosphate dehydrogenase [NAD(P)] [EC:1.1.1.261] Tax=RBG_16_Euryarchaeota_68_13_curated
egsA; NAD(P)-dependent glycerol-1-phosphate dehydrogenase (EC:1.1.1.261)
Glycerol-1-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=G1PDH_METAC
13_1_40cm_4_scaffold_3484_17
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(13775..14533)
DNA (759bp) protein (253aa)
RIO-like kinase; K07178 RIO kinase 1 [EC:2.7.11.1] Tax=RBG_16_Euryarchaeota_68_12_curated
RIO-like serine/threonine protein kinase II n=1 Tax=Halococcus hamelinensis RepID=UPI00029A2231
RIO-like kinase
13_1_40cm_4_scaffold_3484_18
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

14801..15235
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003680219
hypothetical protein Tax=RBG_16_Euryarchaeota_67_27_curated
hypothetical protein
13_1_40cm_4_scaffold_3484_19
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

15246..15644
DNA (399bp) protein (133aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_40cm_4_scaffold_3484_20
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(15641..16084)
DNA (444bp) protein (148aa)
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
GCN5-like N-acetyltransferase id=24592128 bin=RBG_19FT_COMBO_GAL15_69_19 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
acetyltransferase
13_1_40cm_4_scaffold_3484_21
Fischerella sp. JSC-11, Fischerella, Stigonematales, Cyanobacteria, Bacteria

Not on your lists

comp(16145..16432)
DNA (288bp) protein (96aa)
Histidine triad (HIT) protein n=1 Tax=Frankia sp. CN3 RepID=G6H7K5_9ACTO
Histidine triad (HIT) protein {ECO:0000313|EMBL:EHC18008.1}; TaxID=741277 species="Bacteria; Cyanobacteria; Stigonematales; Fischerella.;" source="Fischerella sp. JSC-11.;"
HIT family protein
13_1_40cm_4_scaffold_3484_22
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(16652..17848)
DNA (1197bp) protein (399aa)
Molybdenum cofactor biosynthesis protein MoeA n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFZ0_9BACT
molybdenum cofactor biosynthesis protein MoeA Tax=RBG_16_Euryarchaeota_67_27_curated
molybdenum cofactor biosynthesis protein MoeA
13_1_40cm_4_scaffold_3484_23
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(17896..18396)
DNA (501bp) protein (167aa)
Molybdenum cofactor biosynthesis protein B n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08NS8_STIAD
moaB; molybdenum cofactor biosynthesis protein B; K03638 molybdenum cofactor biosynthesis protein B Tax=RBG_16_Euryarchaeota_68_13_curated
moaB; molybdenum cofactor biosynthesis protein b
13_1_40cm_4_scaffold_3484_24
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(18510..19109)
DNA (600bp) protein (200aa)
miaB2; tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase (EC:2.8.4.3)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036178CE
putative Fe-S oxidoreductase Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Displaying 24 items

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