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13_1_40cm_4_scaffold_3589

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_3589_1
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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1..1059
DNA (1059bp) protein (353aa)
glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.59) Tax=RBG_16_Euryarchaeota_68_12_curated
glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.59)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00035FE407
13_1_40cm_4_scaffold_3589_2
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(1056..1382)
DNA (327bp) protein (109aa)
RNA methyltransferase, TrmH family, group 1 n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7TFV1_9EURY
tRNA:Cm32/Um32 methyltransferase Tax=RBG_16_Euryarchaeota_68_12_curated
RNA methyltransferase, TrmH family, group 1
13_1_40cm_4_scaffold_3589_3
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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1580..2644
DNA (1065bp) protein (355aa)
truA; tRNA pseudouridine synthase A (EC:5.4.99.12) Tax=RBG_16_Euryarchaeota_68_12_curated
truA; tRNA pseudouridine synthase A (EC:5.4.99.12)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037E6759
13_1_40cm_4_scaffold_3589_4

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2727..10064
DNA (7338bp) protein (2446aa)
Hypothetical secreted protein, subtilase family n=1 Tax=uncultured archaeon RepID=D1JBN2_9ARCH
Subtilisin-like serine protease {ECO:0000313|EMBL:AIF19099.1}; TaxID=1456528 species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured marine group II/III euryarchaeote KM3_85_D06.;
peptidase families S8 and S53
13_1_40cm_4_scaffold_3589_5
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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10009..10689
DNA (681bp) protein (227aa)
Zn-ribbon protein, possibly nucleic acid-binding protein n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HPD9_ACIS0
hypothetical protein Tax=RBG_16_Euryarchaeota_67_27_curated
hypothetical protein
13_1_40cm_4_scaffold_3589_6
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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10686..13058
DNA (2373bp) protein (791aa)
hypothetical protein n=1 Tax=Rhodococcus sp. 29MFTsu3.1 RepID=UPI000370040D
Nickel-binding periplasmic protein {ECO:0000313|EMBL:KJL29830.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
transporter peptide-binding protein
13_1_40cm_4_scaffold_3589_7
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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13137..13667
DNA (531bp) protein (177aa)
adenylate kinase (EC:2.7.4.3) Tax=RBG_16_Euryarchaeota_68_13_curated
Putative adenylate kinase n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T921_9EURY
AMP/CMP kinase AK6
13_1_40cm_4_scaffold_3589_8
Thermoplasmatales archaeon SCGC AB-539-N05, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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13658..14281
DNA (624bp) protein (208aa)
Phosphatidylglycerophosphate synthase n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7U4K2_9EURY
Phosphatidylglycerophosphate synthase
Phosphatidylglycerophosphate synthase {ECO:0000313|EMBL:EMR73780.1}; TaxID=1198116 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-539-
13_1_40cm_4_scaffold_3589_9
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(14235..15248)
DNA (1014bp) protein (338aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036A36A4
DNA primase large subunit Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
DNA primase large subunit
13_1_40cm_4_scaffold_3589_10
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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15362..16432
DNA (1071bp) protein (357aa)
UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase (EC:2.4.1.227)
Glycosyltransferase 28 domain n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AQI2_9ARCH
glycosyltransferase family 28 protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_40cm_4_scaffold_3589_11
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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16484..16870
DNA (387bp) protein (129aa)
Glyoxalase/bleomycin resistance protein/dioxygenase domain protein (Fragment) n=1 Tax=mine drainage metagenome RepID=T0ZAT8_9ZZZZ
Lactoylglutathione lyase Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
glyoxalase/bleomycin resistance protein/dioxygenase; K08234 glyoxylase I family protein
13_1_40cm_4_scaffold_3589_12
unknown

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comp(16867..17418)
DNA (552bp) protein (184aa)

This feature has no annotations

13_1_40cm_4_scaffold_3589_13
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(17415..17954)
DNA (540bp) protein (180aa)
ATP:cob(I)alamin adenosyltransferase (EC:2.5.1.17)
ATP:cob(I)alamin adenosyltransferase n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SL45_THEM7
putative cobalamin adenosyltransferase Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_40cm_4_scaffold_3589_14
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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comp(17957..18874)
DNA (918bp) protein (306aa)
Periplasmic binding protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ARA8_RUBXD
periplasmic binding protein
Periplasmic binding protein {ECO:0000313|EMBL:ABG06070.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Ru
13_1_40cm_4_scaffold_3589_15
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(18981..19676)
DNA (696bp) protein (232aa)
psmA2; proteasome subunit alpha (EC:3.4.25.1) Tax=RBG_16_Euryarchaeota_68_12_curated
proteasome subunit alpha 1 (EC:3.4.25.1)
Proteasome, subunit alpha n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INY1_NITGG
13_1_40cm_4_scaffold_3589_16
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(19676..20104)
DNA (429bp) protein (143aa)
psmB3; proteasome subunit beta (EC:3.4.25.1) Tax=RBG_16_Euryarchaeota_68_12_curated
psmB3; proteasome subunit beta (EC:3.4.25.1)
Proteasome subunit beta n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IL55_NITGG
13_1_40cm_4_scaffold_3589_17
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(20302..20883)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IME5_NITGG
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein
13_1_40cm_4_scaffold_3589_18
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(20999..21262)
DNA (264bp) protein (88aa)
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_4_scaffold_3589_19
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(21259..22035)
DNA (777bp) protein (259aa)
Peptidase M29, aminopeptidase II (Fragment) n=1 Tax=mine drainage metagenome RepID=T0ZZC4_9ZZZZ
hypothetical protein
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_4_scaffold_3589_20
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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22854..23717
DNA (864bp) protein (288aa)
AsnC family transcriptional regulator n=1 Tax=Salinispora arenicola RepID=UPI00035F797C
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AIF84062.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Ni
Displaying 20 items

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