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13_1_40cm_4_scaffold_4315

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_4315_1
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(2..1324)
DNA (1323bp) protein (441aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037D1C16
ATP-dependent protease Lon Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
ATP-dependent protease Lon
13_1_40cm_4_scaffold_4315_2
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(1440..1922)
DNA (483bp) protein (161aa)
Putative Ras family protein n=1 Tax=uncultured marine microorganism HF4000_APKG10F13 RepID=B3TBS9_9ZZZZ
small GTP-binding protein Tax=RBG_16_Euryarchaeota_68_12_curated
small GTP-binding protein
13_1_40cm_4_scaffold_4315_3
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(2062..2619)
DNA (558bp) protein (186aa)
Putative Ras family protein n=1 Tax=uncultured marine microorganism HF4000_APKG10F13 RepID=B3TBS9_9ZZZZ
small GTP-binding protein Tax=RBG_16_Euryarchaeota_68_12_curated
small GTP-binding protein
13_1_40cm_4_scaffold_4315_4
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(2698..3258)
DNA (561bp) protein (187aa)
Putative Ras family protein n=1 Tax=uncultured marine microorganism HF4000_APKG10F13 RepID=B3TBS9_9ZZZZ
small GTP-binding protein Tax=RBG_16_Euryarchaeota_68_12_curated
small GTP-binding protein
13_1_40cm_4_scaffold_4315_5
unknown

Not on your lists

3449..3634
DNA (186bp) protein (62aa)

This feature has no annotations

13_1_40cm_4_scaffold_4315_6

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3892..4893
DNA (1002bp) protein (334aa)
50S ribosomal protein L3 n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T8W8_9EURY
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|SAAS:SAAS00023038}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rpl3p; 50S ribosomal protein L3P
13_1_40cm_4_scaffold_4315_7
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists


4890..5894
DNA (1005bp) protein (335aa)
50S ribosomal protein L4 n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T5I4_9EURY
rpl4lp; 50S ribosomal protein L4P Tax=RBG_16_Euryarchaeota_68_12_curated
rpl4lp; 50S ribosomal protein L4P
13_1_40cm_4_scaffold_4315_8
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists


5882..6178
DNA (297bp) protein (99aa)
50S ribosomal protein L23P n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T519_9EURY
50S ribosomal protein L23P Tax=RBG_16_Euryarchaeota_68_12_curated
50S ribosomal protein L23P
13_1_40cm_4_scaffold_4315_9
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists


6178..6891
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000381615B
ribosomal protein L2; K02886 large subunit ribosomal protein L2 Tax=RBG_16_Euryarchaeota_68_12_curated
ribosomal protein L2
13_1_40cm_4_scaffold_4315_10
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists


6898..7329
DNA (432bp) protein (144aa)
30S ribosomal protein S19P n=2 Tax=Euryarchaeota RepID=M9SJ65_9EURY
SSU ribosomal protein S15e (S19p) Tax=RBG_16_Euryarchaeota_68_13_curated
30S ribosomal protein S19
13_1_40cm_4_scaffold_4315_11

Not on your lists


7337..7792
DNA (456bp) protein (152aa)
50S ribosomal protein L22P n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T8X2_9EURY
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004007}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
ribosomal protein L22(archaeal)/L17(eukaryotic/archaeal)
13_1_40cm_4_scaffold_4315_12

Not on your lists


7794..8687
DNA (894bp) protein (298aa)
30S ribosomal protein S3 n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000381ACEF
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rps3p; 30S ribosomal protein S3P
13_1_40cm_4_scaffold_4315_13
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists


8721..8951
DNA (231bp) protein (77aa)
50S ribosomal protein L29P n=2 Tax=unclassified Thermoplasmatales RepID=M7U4Q9_9EURY
LSU ribosomal protein L29P Tax=RBG_16_Euryarchaeota_68_12_curated
LSU ribosomal protein L35e (L29p)
13_1_40cm_4_scaffold_4315_14
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

8948..9199
DNA (252bp) protein (84aa)
ribonuclease P protein component 1; K03538 ribonuclease P protein subunit POP4 [EC:3.1.26.5] Tax=RBG_16_Euryarchaeota_68_12_curated
Ribonuclease P protein component 1 n=1 Tax=Methanothermococcus okinawensis (strain DSM 14208 / JCM 11175 / IH1) RepID=F8AM66_METOI
ribonuclease P protein component 1
13_1_40cm_4_scaffold_4315_15
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists


9196..9657
DNA (462bp) protein (154aa)
30S ribosomal protein S17 n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036369E0
archaeal ribosomal protein S17P Tax=RBG_16_Euryarchaeota_68_12_curated
archaeal ribosomal protein S17P
13_1_40cm_4_scaffold_4315_16
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists


9654..10052
DNA (399bp) protein (133aa)
50S ribosomal protein L14 n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HJQ3_ACIS0
50S ribosomal protein L14P Tax=RBG_16_Euryarchaeota_68_12_curated
50S ribosomal protein L14P
13_1_40cm_4_scaffold_4315_17
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists


10063..10425
DNA (363bp) protein (121aa)
50S ribosomal protein L24P n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=D3TB37_ACIB4
ribosomal protein L24
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_4_scaffold_4315_18
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

10505..11155
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003630352
30S ribosomal protein S4e Tax=RBG_16_Euryarchaeota_68_12_curated
rps4e; 30S ribosomal protein S4e
13_1_40cm_4_scaffold_4315_19

Not on your lists


11152..11670
DNA (519bp) protein (173aa)
50S ribosomal protein L5 n=1 Tax=Thermoplasmatales archaeon BRNA1 RepID=M4YQQ9_9EURY
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
LSU ribosomal protein L5P
13_1_40cm_4_scaffold_4315_20
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists


11667..11816
DNA (150bp) protein (50aa)
30S ribosomal protein S14 type Z n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T8Y0_9EURY
rps14P; 30S ribosomal protein S14P Tax=RBG_16_Euryarchaeota_68_12_curated
rps14P; 30S ribosomal protein S14P
13_1_40cm_4_scaffold_4315_21

Not on your lists


11825..12214
DNA (390bp) protein (130aa)
30S ribosomal protein S8 n=1 Tax=Thermoplasmatales archaeon BRNA1 RepID=M4YUN4_9EURY
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
SSU ribosomal protein S8P
13_1_40cm_4_scaffold_4315_22
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists


12223..12768
DNA (546bp) protein (182aa)
50S ribosomal protein L6 n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000372DEA1
50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 Tax=RBG_16_Euryarchaeota_68_12_curated
rpl6p; 50S ribosomal protein L6
13_1_40cm_4_scaffold_4315_23
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

12773..13609
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000377A3F2
ribosomal protein L32E Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
rpl32e; 50S ribosomal protein L32e
13_1_40cm_4_scaffold_4315_24
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

13609..14076
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003673D19
LSU ribosomal protein L19E Tax=RBG_16_Euryarchaeota_68_13_curated
rpl19e; 50S ribosomal protein L19e
13_1_40cm_4_scaffold_4315_25

Not on your lists


14073..14273
DNA (201bp) protein (67aa)
50S ribosomal protein L18 n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036D4605
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337, ECO:0000256|SAAS:SAAS00243986}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rpl18p; 50S ribosomal protein L18
Displaying 25 items

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