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13_1_40cm_4_scaffold_4880

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Displaying items 1-30 of 33 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_4880_1
unknown

Not on your lists

2..208
DNA (207bp) protein (69aa)

This feature has no annotations

13_1_40cm_4_scaffold_4880_trna_2
unknown

Not on your lists

comp(234..305)
DNA (72bp)
transferRNA
13_1_40cm_4_scaffold_4880_2
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

425..2416
DNA (1992bp) protein (664aa)
rne; ribonuclease E (EC:3.1.4.-); K08300 ribonuclease E [EC:3.1.26.12] Tax=RBG_16_Euryarchaeota_68_12_curated
Proline-rich protein 12 n=2 Tax=Cricetulus griseus RepID=G3IHD3_CRIGR
SARP family transcriptional regulator
13_1_40cm_4_scaffold_4880_3
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

2466..3482
DNA (1017bp) protein (339aa)
TIGR01210 family protein n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HJD4_ACIS0
TIGR01210 family protein Tax=RBG_16_Euryarchaeota_67_27_curated
TIGR01210 family protein
13_1_40cm_4_scaffold_4880_4
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

3520..3846
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=T1BUM6_9ZZZZ
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein
13_1_40cm_4_scaffold_4880_5
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(3916..4230)
DNA (315bp) protein (105aa)
50S ribosomal protein L12 n=2 Tax=unclassified Thermoplasmatales RepID=M7T3Z7_9EURY
rpl12p; 50S ribosomal protein L12 Tax=RBG_16_Euryarchaeota_68_12_curated
rpl12p; 50S ribosomal protein L12P
13_1_40cm_4_scaffold_4880_6
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists


comp(4265..5263)
DNA (999bp) protein (333aa)
50S ribosomal protein L10 n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HJ28_ACIS0
rplP0; acidic ribosomal protein P0 Tax=RBG_16_Euryarchaeota_68_12_curated
ribosomal protein L10
13_1_40cm_4_scaffold_4880_7
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists


comp(5274..5708)
DNA (435bp) protein (145aa)
50S ribosomal protein L1 n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003677105
rpl1P; 50S ribosomal protein L1P Tax=RBG_16_Euryarchaeota_68_12_curated
50S ribosomal protein L1
13_1_40cm_4_scaffold_4880_8
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

6290..6751
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EF56_9CHLR
hypothetical protein Tax=RBG_16_Euryarchaeota_67_27_curated
hypothetical protein
13_1_40cm_4_scaffold_4880_9
unknown

Not on your lists

comp(6633..7322)
DNA (690bp) protein (230aa)

This feature has no annotations

13_1_40cm_4_scaffold_4880_10
Halovivax ruber, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7348..8664
DNA (1317bp) protein (439aa)
WD40-like repeat protein n=1 Tax=Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) RepID=L0IE27_HALRX
WD40-like repeat protein
WD40-like repeat protein {ECO:0000313|EMBL:AGB17019.1}; TaxID=797302 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax ruber (strain DSM 18193
13_1_40cm_4_scaffold_4880_11
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

8755..9075
DNA (321bp) protein (107aa)
Putative uncharacterized protein n=1 Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BCP6_MEISD
hypothetical protein Tax=RBG_16_Euryarchaeota_67_27_curated
hypothetical protein
13_1_40cm_4_scaffold_4880_12
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

9178..9993
DNA (816bp) protein (272aa)
Transcriptional regulator, TrmB n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XQQ4_METZD
transcriptional regulator TrmB Tax=RBG_16_Euryarchaeota_68_13_curated
transcriptional regulator TrmB
13_1_40cm_4_scaffold_4880_13
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists


comp(10003..10485)
DNA (483bp) protein (161aa)
50S ribosomal protein L11 n=2 Tax=unclassified Thermoplasmatales RepID=M7TUR0_9EURY
rpl11p; 50S ribosomal protein L11P Tax=RBG_16_Euryarchaeota_68_12_curated
50S ribosomal protein L11
13_1_40cm_4_scaffold_4880_14
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists


comp(10486..11430)
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003720D25
Putative transcription antitermination protein NusG Tax=RBG_16_Euryarchaeota_68_12_curated
Putative transcription antitermination protein NusG
13_1_40cm_4_scaffold_4880_15
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(11444..11683)
DNA (240bp) protein (80aa)
Protein translocase subunit SecE n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T8P5_9EURY
secE; preprotein translocase subunit SecE Tax=RBG_16_Euryarchaeota_68_12_curated
secE; preprotein translocase subunit SecE
13_1_40cm_4_scaffold_4880_16
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(11685..12791)
DNA (1107bp) protein (369aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003829ACA
cell division protein FtsZ Tax=RBG_16_Euryarchaeota_68_12_curated
cell division protein FtsZ
13_1_40cm_4_scaffold_4880_17
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12953..14344
DNA (1392bp) protein (464aa)
FAD linked oxidase; K00803 alkyldihydroxyacetonephosphate synthase [EC:2.5.1.26] Tax=GWD2_Deltaproteobacteria_55_8_curated
Putative FAD binding domain protein id=2130674 bin=GWD2_Deltaproteobacteria_55_8 species=uncultured marine microorganism HF4000_ANIW141A21 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
FAD linked oxidase
13_1_40cm_4_scaffold_4880_18
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

14731..15174
DNA (444bp) protein (148aa)
Glyoxalase/bleomycin resistance protein/dioxygenase domain protein (Fragment) n=1 Tax=mine drainage metagenome RepID=T0ZAT8_9ZZZZ
Lactoylglutathione lyase Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_4_scaffold_4880_19
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(15215..16285)
DNA (1071bp) protein (357aa)
Cell division protein FtsZ n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HP81_ACIS0
cell division protein FtsZ Tax=RBG_16_Euryarchaeota_68_12_curated
cell division protein FtsZ
13_1_40cm_4_scaffold_4880_20
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(16443..17708)
DNA (1266bp) protein (422aa)
Glycosyl hydrolase n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5STH3_9BACT
Glycosyl hydrolase Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_4_scaffold_4880_21
unknown

Not on your lists

comp(17759..18148)
DNA (390bp) protein (130aa)

This feature has no annotations

13_1_40cm_4_scaffold_4880_22
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(18155..20008)
DNA (1854bp) protein (618aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon A-plasma RepID=T0LS46_9EURY
ABC-type peptide transporter, ATPase component; K02032 peptide/nickel transport system ATP-binding protein Tax=RBG_16_Euryarchaeota_68_12_curated
ABC-type peptide transporter, ATPase component
13_1_40cm_4_scaffold_4880_23
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(20001..22370)
DNA (2370bp) protein (790aa)
Peptide ABC transporter atp-binding protein n=1 Tax=Pyrococcus sp. ST04 RepID=I3RFA4_9EURY
putative oligopeptide/dipeptide ABC transporter, ATP-binding protein Tax=RBG_16_Euryarchaeota_68_12_curated
peptide ABC transporter atp-binding protein
13_1_40cm_4_scaffold_4880_24
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(22330..23715)
DNA (1386bp) protein (462aa)
Putative ABC-type peptide transport system,permease component 2 n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W8F1_UNCMA
binding-protein-dependent transport systems inner membrane component; K02034 peptide/nickel transport system permease protein Tax=RBG_16_Euryarchaeota_68_12_curated
putative ABC-type peptide transport system, permease component 2
13_1_40cm_4_scaffold_4880_25
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(23712..24734)
DNA (1023bp) protein (341aa)
Putative ABC-type peptide transport system,permease component 1 n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W8F2_UNCMA
putative ABC-type peptide transport system, permease component 1; K02033 peptide/nickel transport system permease protein Tax=RBG_16_Euryarchaeota_68_12_curated
putative ABC-type peptide transport system, permease component 1
13_1_40cm_4_scaffold_4880_26

Not on your lists

comp(24784..26643)
DNA (1860bp) protein (620aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036D000B
ABC transporter, substrate-binding protein (ABC.PE.S) {ECO:0000313|EMBL:AIF05878.1}; TaxID=1457953 species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured marine group II/III eury
family 5 extracellular solute-binding protein
13_1_40cm_4_scaffold_4880_27
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(26784..28115)
DNA (1332bp) protein (444aa)
Putative HD domain protein n=1 Tax=uncultured marine microorganism HF4000_ANIW137P11 RepID=B3T557_9ZZZZ
metal dependent phosphohydrolase; K06885 Tax=RBG_16_Euryarchaeota_68_12_curated
metal dependent phosphohydrolase
13_1_40cm_4_scaffold_4880_28
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

28257..28856
DNA (600bp) protein (200aa)
hypothetical protein n=1 Tax=crenarchaeote SCGC AAA261-N23 RepID=UPI00037A42DD
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_4_scaffold_4880_trna_1
unknown

Not on your lists

28911..28983
DNA (73bp)
transferRNA
Displaying items 1-30 of 33 in total

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