ggKbase | organisms

Consensus taxonomy: Euryarchaeota → Archaea

Taxonomy override: Euryarchaeota

Metagenomic Context

Parent: 13_1_40cm_4_UNK

Properties

Avg. coverage: 12.06 Longest contig: 43.14 Kbp Bin length: 27.61 Mbp GC content: 62.74 %

Contigs count: 11446 Features count: 36114 rRNAs count: 0 tRNAs count: 275

Genome completeness

megabin RP 34 / 55 MC: 33 BSCG 23 / 51 MC: 18 ASCG 38 / 38 MC: 38

Displaying items 11051-11100 of 11446 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
13_1_40cm_4_scaffold_239249 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (66.67%)	3	1062 bp	64.41	21.19	100.28
13_1_40cm_4_scaffold_240960 Species: RBG_16_Euryarchaeota_68_13_curated (50%)	2	1056 bp	67.52	7.95	100.28
13_1_40cm_4_scaffold_196463 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (60%)	5	2100 bp	66.86	50.92	100.29
13_1_40cm_4_scaffold_149836 Species: Halococcus saccharolyticus (50%)	2	1397 bp	72.44	7.09	100.29
13_1_40cm_4_scaffold_243445 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (100%)	2	1047 bp	61.13	5.16	100.29
13_1_40cm_4_scaffold_243491 Species: RBG_16_Euryarchaeota_67_27_curated (50%)	2	1047 bp	65.90	15.62	100.29
13_1_40cm_4_scaffold_243338 Species: RBG_16_Euryarchaeota_67_27_curated (50%)	2	1047 bp	66.95	3.44	100.29
13_1_40cm_4_scaffold_244117 Species: RBG_16_Euryarchaeota_68_13_curated (50%)	2	1044 bp	63.79	5.75	100.29
13_1_40cm_4_scaffold_244305 Species: RBG_16_Euryarchaeota_68_13_curated (50%)	2	1044 bp	65.33	22.56	100.29
13_1_40cm_4_scaffold_151202 Species: RBG_16_Euryarchaeota_68_13_curated (66.67%)	3	1391 bp	64.49	10.14	100.29
13_1_40cm_4_scaffold_28637 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	4	3129 bp	65.68	54.31	100.29
13_1_40cm_4_scaffold_248421 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (100%)	2	1029 bp	67.54	17.93	100.29
13_1_40cm_4_scaffold_254734 Species: Thermococcus cleftensis (50%)	2	1008 bp	72.72	2.98	100.30
13_1_40cm_4_scaffold_254561 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	1008 bp	67.96	3.27	100.30
13_1_40cm_4_scaffold_256479 Species: RBG_16_Euryarchaeota_67_27_curated (66.67%)	3	1002 bp	62.18	19.61	100.30
13_1_40cm_4_scaffold_53140 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (66.67%)	3	2333 bp	64.04	14.40	100.30
13_1_40cm_4_scaffold_127296 Species: RBG_16_Euryarchaeota_67_27_curated (50%)	2	2653 bp	54.17	16.38	100.30
13_1_40cm_4_scaffold_346233 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (100%)	3	1322 bp	67.32	17.48	100.30
13_1_40cm_4_scaffold_41572 Species: RBG_16_Euryarchaeota_68_12_curated (100%)	4	2620 bp	66.76	6.30	100.31
13_1_40cm_4_scaffold_328322 Species: RBG_16_Euryarchaeota_68_12_curated (100%)	2	1292 bp	62.77	2.90	100.31
13_1_40cm_4_scaffold_113718 Species: Methanosarcina mazei (50%)	2	1603 bp	50.78	1.68	100.31
13_1_40cm_4_scaffold_329096 Species: RBG_16_Euryarchaeota_68_13_curated (50%)	2	1277 bp	70.56	2.58	100.31
13_1_40cm_4_scaffold_373630 Species: RBG_16_Euryarchaeota_68_13_curated (50%)	2	1265 bp	66.40	2.49	100.32
13_1_40cm_4_scaffold_306337 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (66.67%)	3	2144 bp	64.88	25.59	100.33
13_1_40cm_4_scaffold_86991 Species: RBG_16_Euryarchaeota_68_12_curated (66.67%)	3	1830 bp	68.20	4.26	100.33
13_1_40cm_4_scaffold_65198 Species: RBG_16_Euryarchaeota_68_13_curated (50%)	2	2111 bp	62.91	1.99	100.33
13_1_40cm_4_scaffold_89301 Species: RBG_16_Euryarchaeota_68_12_curated (66.67%)	3	1806 bp	67.50	4.32	100.33
13_1_40cm_4_scaffold_106428 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (100%)	2	2105 bp	60.38	9.51	100.33
13_1_40cm_4_scaffold_200184 Species: Methanofollis liminatans (50%)	2	1199 bp	69.64	2.25	100.33
13_1_40cm_4_scaffold_292511 Species: RBG_13_Euryarchaeota_61_15_curated (50%)	2	1498 bp	66.15	8.61	100.33
13_1_40cm_4_scaffold_210862 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (100%)	2	1163 bp	68.36	9.16	100.34
13_1_40cm_4_scaffold_213650 Species: RBG_16_Euryarchaeota_68_13_curated (50%)	2	1154 bp	66.46	34.97	100.35
13_1_40cm_4_scaffold_215170 Species: RBG_16_Euryarchaeota_68_13_curated (50%)	2	1148 bp	68.47	32.40	100.35
13_1_40cm_4_scaffold_242150 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (75%)	4	2003 bp	65.80	29.72	100.35
13_1_40cm_4_scaffold_74645 Phylum: Euryarchaeota (66.67%)	3	1976 bp	64.78	12.75	100.35
13_1_40cm_4_scaffold_224521 Species: Archaeoglobus fulgidus (50%)	2	1115 bp	50.04	11.43	100.36
13_1_40cm_4_scaffold_105235 Species: Methanoculleus sp. MH98A (50%)	2	1665 bp	69.37	7.39	100.36
13_1_40cm_4_scaffold_362513 Phylum: Euryarchaeota (66.67%)	3	1109 bp	64.83	37.06	100.36
13_1_40cm_4_scaffold_520432 Species: Methanocella conradii (50%)	2	1106 bp	59.31	2.17	100.36
13_1_40cm_4_scaffold_227818 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (100%)	2	1103 bp	52.31	1.63	100.36
13_1_40cm_4_scaffold_155280 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (66.67%)	3	1372 bp	67.49	3.72	100.36
13_1_40cm_4_scaffold_230397 Species: RBG_16_Euryarchaeota_68_13_curated (50%)	2	1094 bp	72.30	2.33	100.37
13_1_40cm_4_scaffold_310347 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (100%)	2	1088 bp	66.91	10.20	100.37
13_1_40cm_4_scaffold_38156 Species: Ferroplasma acidarmanus (50%)	2	3258 bp	59.85	5.57	100.37
13_1_40cm_4_scaffold_110117 Species: RBG_16_Euryarchaeota_68_12_curated (66.67%)	3	1629 bp	64.76	20.44	100.37
13_1_40cm_4_scaffold_161269 Species: RBG_16_Euryarchaeota_67_27_curated (50%)	2	1345 bp	63.79	12.38	100.37
13_1_40cm_4_scaffold_235480 Species: Archaeoglobus profundus (50%)	2	1076 bp	57.62	7.81	100.37
13_1_40cm_4_scaffold_241168 Species: RBG_16_Euryarchaeota_67_27_curated (50%)	2	1055 bp	63.89	8.82	100.38
13_1_40cm_4_scaffold_41628 Species: Halovivax ruber (50%)	2	2618 bp	54.89	3.21	100.38
13_1_40cm_4_scaffold_87095 Species: RBG_16_Euryarchaeota_68_13_curated (66.67%)	3	1829 bp	64.90	6.64	100.38

Displaying items 11051-11100 of 11446 in total

13_1_40CM_4_Euryarchaeota_megabin_63_12

13_1_40CM_4_Euryarchaeota_63_12

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

13_1_40CM_4_Euryarchaeota_megabin_63_12

13_1_40CM_4_Euryarchaeota_63_12

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

Merge with other organism

Processing

Terms of Service

Search Help