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13_2_20cm_scaffold_1128

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Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_1128_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(3..410)
DNA (408bp) protein (136aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_2_20cm_scaffold_1128_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(478..1368)
DNA (891bp) protein (297aa)
3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100) Tax=RBG_16_Gemmatimonadetes_66_8_curated
3-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax=uncultured bacterium RepID=Q565X5_9BACT
fabG; 3-ketoacyl-ACP reductase
13_2_20cm_scaffold_1128_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

1397..3433
DNA (2037bp) protein (679aa)
carbon starvation protein A n=1 Tax=Brevibacillus sp. phR RepID=UPI0002EF4965 rbh
cstA; carbon starvation protein A; K06200 carbon starvation protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
carbon starvation protein CstA
13_2_20cm_scaffold_1128_4
unknown

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3417..3629
DNA (213bp) protein (71aa)

This feature has no annotations

13_2_20cm_scaffold_1128_5
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

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3677..4033
DNA (357bp) protein (119aa)
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
13_2_20cm_scaffold_1128_6
RLO_PLX_64_10, Bacteria

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4223..6763
DNA (2541bp) protein (847aa)
NHL repeat-containing protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
WD40-like Beta Propeller id=3409996 bin=GWA2_Ignavibacteria_55_11 species=Bacillus cereus genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
WD40-like beta Propeller containing protein
13_2_20cm_scaffold_1128_7
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

6768..8207
DNA (1440bp) protein (480aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
Putative uncharacterized protein id=3207178 bin=GWC2_Ignavibacteria_56_12 species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
13_2_20cm_scaffold_1128_8

Not on your lists

8308..9372
DNA (1065bp) protein (355aa)
Serine/threonine kinase family protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C787_9PLAN
Marine sediment metagenome DNA, contig: S01H4_S15006 {ECO:0000313|EMBL:GAH14577.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
OmpA/MotB domain-containing protein
13_2_20cm_scaffold_1128_9
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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9497..10054
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ACD2_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH40159.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
13_2_20cm_scaffold_1128_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

10062..12770
DNA (2709bp) protein (903aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ACD2_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG88125.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_1128_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(12775..14358)
DNA (1584bp) protein (528aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABL9_GEMAT
peptidase M14 carboxypeptidase A
Peptidase M14 carboxypeptidase A {ECO:0000313|EMBL:AHG92073.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_1128_12
Scytonema tolypothrichoides, Scytonema, Nostocales, Cyanobacteria, Bacteria

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comp(14366..14806)
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Kordiimonas gwangyangensis RepID=UPI0003639004
Translation initiation inhibitor, yjgF family protein {ECO:0000313|EMBL:KIJ83588.1}; TaxID=1233231 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema tolypot
putative translation initiation inhibitor, yjgF family
13_2_20cm_scaffold_1128_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(14941..16119)
DNA (1179bp) protein (393aa)
Major facilitator family transporter Tax=RBG_16_Gemmatimonadetes_66_8_curated
Membrane protein, major facilitator superfamily id=4683444 bin=GWC2_Nitrospirae_57_13 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
major facilitator superfamily membrane protein
13_2_20cm_scaffold_1128_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(16109..17731)
DNA (1623bp) protein (541aa)
Uncharacterized protein n=1 Tax=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) RepID=B2A7Y2_NATTJ rbh
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_2_20cm_scaffold_1128_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(17722..18960)
DNA (1239bp) protein (413aa)
leuA3; 2-isopropylmalate synthase (EC:2.3.3.13)
2-isopropylmalate synthase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FMN1_SORC5 id=5224560 bin=16ft_combo_ws3_JS1 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
2-isopropylmalate synthase Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_2_20cm_scaffold_1128_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

19014..20246
DNA (1233bp) protein (411aa)
hypothetical protein n=1 Tax=Balneola vulgaris RepID=UPI000370FF24
peptidase M20
Peptidase M20 {ECO:0000313|EMBL:AHG91478.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_1128_17
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(20254..20532)
DNA (279bp) protein (93aa)
Peroxiredoxin n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WF69_9CYAN
peroxiredoxin
Peroxiredoxin {ECO:0000313|EMBL:AFZ19050.1}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC 7113.;"
13_2_20cm_scaffold_1128_18
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(20713..21102)
DNA (390bp) protein (130aa)
Multidrug resistance protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5R1_GEMAT
multidrug resistance protein
Multidrug resistance protein {ECO:0000313|EMBL:BAH37571.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (stra
Displaying 18 items

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