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13_2_20cm_scaffold_118

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_118_1
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

2..643
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Anaeromusa acidaminophila RepID=UPI0003810577
hisS; histidyl-tRNA synthetase; K02502 ATP phosphoribosyltransferase regulatory subunit Tax=CG_Anaero_02
hisZ; regulatory subunit of short ATP phosphoribosyltransferase
13_2_20cm_scaffold_118_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

640..1281
DNA (642bp) protein (214aa)
hisG; ATP phosphoribosyltransferase (EC:2.4.2.17) Tax=GWA2_Rokubacteria_70_23_curated
hisG; ATP phosphoribosyltransferase (EC:2.4.2.17)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase id=4831881 bin=GWC2_Methylomirabilis_70_24 species=Burkholderia rhizoxinica genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_2_20cm_scaffold_118_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1271..2128)
DNA (858bp) protein (286aa)
pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262); K00097 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
4-hydroxythreonine-4-phosphate dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9L0_GEMAT
4-hydroxythreonine-4-phosphate dehydrogenase
13_2_20cm_scaffold_118_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(2154..3476)
DNA (1323bp) protein (441aa)
putative peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8); K03771 peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative peptidyl-prolyl cis-trans isomerase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9L1_GEMAT
SurA domain-containing protein
13_2_20cm_scaffold_118_5
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3478..4935)
DNA (1458bp) protein (486aa)
putative peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8); K03771 peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] Tax=GWC2_Gemmatimonadetes_71_10_curated
Peptidyl-prolyl cis-trans isomerase D n=1 Tax=Azoarcus sp. KH32C RepID=H0PTI5_9RHOO
PpiC-type peptidyl-prolyl cis-trans isomerase
13_2_20cm_scaffold_118_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(4945..8223)
DNA (3279bp) protein (1093aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=861299 species="Bacteria; Ge
Transcription-repair-coupling factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9L3_GEMAT
transcription-repair coupling factor
13_2_20cm_scaffold_118_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(8223..9956)
DNA (1734bp) protein (578aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9L4_GEMAT
Double-transmembrane region domain protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
double-transmembrane region domain protein
13_2_20cm_scaffold_118_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(9953..10837)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9L5_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
protein of unknown function DUF58
13_2_20cm_scaffold_118_9
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

11011..12372
DNA (1362bp) protein (454aa)
LPXTG-motif cell wall anchor domain protein n=1 Tax=Streptococcus sp. C300 RepID=E9FIU8_9STRE
GF13555 gene product from transcript GF13555-RA Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
cell wall surface anchor family protein
13_2_20cm_scaffold_118_10
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

12464..13999
DNA (1536bp) protein (512aa)
peptidase M28 Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Aminopeptidase id=3410210 bin=GWA2_Ignavibacteria_55_11 species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
peptidase M28
13_2_20cm_scaffold_118_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(14003..15070)
DNA (1068bp) protein (356aa)
Transcription termination factor Rho n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RHO_GEMAT
transcription termination factor; K03628 transcription termination factor Rho Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
transcription termination factor
13_2_20cm_scaffold_118_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

15118..16917
DNA (1800bp) protein (600aa)
Elongation factor 4 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9L7_GEMAT rbh
lepA; GTP-binding protein LepA; K03596 GTP-binding protein LepA Tax=RBG_16_Gemmatimonadetes_66_8_curated
lepA; GTP-binding protein LepA
13_2_20cm_scaffold_118_13
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

16910..17947
DNA (1038bp) protein (346aa)
putative heptosyltransferase (EC:2.4.-.-); K02843 heptosyltransferase II [EC:2.4.-.-] Tax=GWC2_Gemmatimonadetes_71_10_curated
glycosyl transferase family 9
Putative heptosyltransferase id=3656687 bin=GWC2_Ignavibacteria_56_12 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
13_2_20cm_scaffold_118_14
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

17925..18890
DNA (966bp) protein (322aa)
glk; glucokinase (EC:2.7.1.2); K00845 glucokinase [EC:2.7.1.2] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Glucokinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9L9_GEMAT
ROK family protein
13_2_20cm_scaffold_118_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

18914..19837
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9M0_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PfkB domain protein
13_2_20cm_scaffold_118_16
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

19834..20751
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9M1_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_2_20cm_scaffold_118_17
unknown

Not on your lists

20748..21194
DNA (447bp) protein (149aa)

This feature has no annotations

13_2_20cm_scaffold_118_18
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

21191..22345
DNA (1155bp) protein (385aa)
hypothetical protein n=1 Tax=unclassified Aminicenantes RepID=UPI00037F5D1C
cystathionine beta-lyase/cystathionine gamma-synthase Tax=RBG_16_Gemmatimonadetes_66_8_curated
Cys/Met metabolism pyridoxal-phosphate-dependent protein
13_2_20cm_scaffold_118_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

22346..23041
DNA (696bp) protein (232aa)
Cell division ATP-binding protein FtsE n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9M5_GEMAT
ftsE; cell division ATP-binding protein FtsE; K09812 cell division transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
cell division ATP-binding protein FtsE
13_2_20cm_scaffold_118_20
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

23038..23895
DNA (858bp) protein (286aa)
Cell division protein FtsX n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9M6_GEMAT
ftsX; cell division protein FtsX; K09811 cell division transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
protein of unknown function DUF214
13_2_20cm_scaffold_118_21
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

23907..25097
DNA (1191bp) protein (397aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9M7_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
Peptidase M23
13_2_20cm_scaffold_118_22
RBG_13_Aminicenantes_59_9_curated, Aminicenantes, Bacteria

Not on your lists

comp(25124..25363)
DNA (240bp) protein (80aa)
Tax=RBG_13_Aminicenantes_59_9_curated
13_2_20cm_scaffold_118_23
unknown

Not on your lists

comp(25372..25674)
DNA (303bp) protein (101aa)

This feature has no annotations

13_2_20cm_scaffold_118_24
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(25795..26523)
DNA (729bp) protein (243aa)
Putative two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5L7_GEMAT
putative two-component response regulator; K02488 two-component system, cell cycle response regulator Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
diguanylate cyclase
13_2_20cm_scaffold_118_25
unknown

Not on your lists

26681..26962
DNA (282bp) protein (94aa)

This feature has no annotations

Displaying 25 items

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