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13_2_20cm_scaffold_13808

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_13808_1
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1..183
DNA (183bp) protein (61aa)
cytochrome c oxidase subunit I (EC:1.9.3.1); K02274 cytochrome c oxidase subunit I [EC:1.9.3.1] Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Cytochrome c oxidase subunit I id=1881839 bin=GWD2_Deltaproteobacteria_55_8 species=Isosphaera pallida genus=Isosphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
cytochrome C oxidase
13_2_20cm_scaffold_13808_2
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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196..828
DNA (633bp) protein (211aa)
ctaE; putative transmembrane cytochrome oxidase subunit; K02276 cytochrome c oxidase subunit III [EC:1.9.3.1] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Cytochrome c oxidase subunit III id=1881833 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
ctaE; putative transmembrane cytochrome oxidase subunit
13_2_20cm_scaffold_13808_3
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

837..1115
DNA (279bp) protein (93aa)
caa(3)-type oxidase, subunit IV Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Caa(3)-type oxidase, subunit IV id=4083662 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_13808_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

1157..1960
DNA (804bp) protein (268aa)
protoheme IX farnesyltransferase; K02301 protoheme IX farnesyltransferase [EC:2.5.1.-] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ctaB; protoheme IX farnesyltransferase (Heme O synthase) (Heme B farnesyltransferase) (EC:2.5.1.-) id=14429801 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
protoheme IX farnesyltransferase
13_2_20cm_scaffold_13808_5
unknown

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1971..2123
DNA (153bp) protein (51aa)

This feature has no annotations

13_2_20cm_scaffold_13808_6
unknown

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2120..2308
DNA (189bp) protein (63aa)

This feature has no annotations

13_2_20cm_scaffold_13808_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

2319..3362
DNA (1044bp) protein (348aa)
cld2; chlorite dismutase (EC:1.13.11.49); K09162 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
cld2; chlorite dismutase (EC:1.13.11.49)
chlorite dismutase n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2AC35
13_2_20cm_scaffold_13808_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

3407..4363
DNA (957bp) protein (319aa)
hemE; uroporphyrinogen decarboxylase (EC:4.1.1.37); K01599 uroporphyrinogen decarboxylase [EC:4.1.1.37] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hemE; uroporphyrinogen decarboxylase (EC:4.1.1.37)
Uroporphyrinogen decarboxylase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCL2_9BACT
13_2_20cm_scaffold_13808_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

4353..5264
DNA (912bp) protein (304aa)
ferrochelatase (EC:4.99.1.1); K01772 ferrochelatase [EC:4.99.1.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ferrochelatase (EC:4.99.1.1)
Ferrochelatase n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EFF6_9CHLR
13_2_20cm_scaffold_13808_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

5261..6310
DNA (1050bp) protein (350aa)
hemY2; hypothetical protein; K00231 oxygen-dependent protoporphyrinogen oxidase [EC:1.3.3.4] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
HemY2 protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G3I1_SORC5
hemY2; hypothetical protein
13_2_20cm_scaffold_13808_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(6317..6484)
DNA (168bp) protein (56aa)
tkt; transketolase (EC:2.2.1.1); K00615 transketolase [EC:2.2.1.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
tkt; transketolase (EC:2.2.1.1)
Transketolase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEC1_GEMAT
13_2_20cm_scaffold_13808_12
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6881..7735
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Cronobacter dublinensis 582 RepID=K8AXY3_9ENTR
Uncharacterized protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
13_2_20cm_scaffold_13808_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(8326..8640)
DNA (315bp) protein (105aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_2_20cm_scaffold_13808_14
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

8846..9679
DNA (834bp) protein (278aa)
WD40 domain protein beta Propeller n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HEA1_ANADF
periplasmic component of the Tol biopolymer transport system Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
WD40-like beta Propeller containing protein
13_2_20cm_scaffold_13808_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

9679..10389
DNA (711bp) protein (237aa)
signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Signal peptidase I n=1 Tax=Hippea maritima (strain ATCC 700847 / DSM 10411 / MH2) RepID=F2LVW5_HIPMA
signal peptidase I
13_2_20cm_scaffold_13808_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

10506..11054
DNA (549bp) protein (183aa)
hypothetical protein n=1 Tax=Synechococcus sp. PCC 7336 RepID=UPI0003473538
RNA polymerase sigma factor, sigma-70 family
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AHG93808.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_13808_17
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11051..11791
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XSW6_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EON22442.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
hypothetical protein
13_2_20cm_scaffold_13808_18
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

11859..12251
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Cylindrospermum stagnale PCC 7417 RepID=K9WQZ2_9NOST
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIE85381.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsen
Displaying 18 items

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