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13_2_20cm_scaffold_184

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_184_1
GWC1_OD1_48_8_partial, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

2..271
DNA (270bp) protein (90aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU99240.1}; TaxID=1618666 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWC1_48_8.;"
13_2_20cm_scaffold_184_2
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

347..1912
DNA (1566bp) protein (522aa)
4-coumarate--CoA ligase (EC:6.2.1.12)
4-coumarate--CoA ligase {ECO:0000313|EMBL:AEN72609.1}; EC=6.2.1.12 {ECO:0000313|EMBL:AEN72609.1};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermacea
4-coumarate--CoA ligase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SH91_RHOMR rbh
13_2_20cm_scaffold_184_3
Deinococcus radiodurans, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(1925..2419)
DNA (495bp) protein (165aa)
Acetyltransferase, putative n=1 Tax=Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422) RepID=Q9RWJ2_DEIRA
acetyltransferase
Acetyltransferase, putative {ECO:0000313|EMBL:AAF10251.1}; TaxID=243230 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus radioduran
13_2_20cm_scaffold_184_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

2448..4652
DNA (2205bp) protein (735aa)
Serine/threonine protein kinase n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LFQ2_9BACT
protein kinase
Protein kinase {ECO:0000313|EMBL:AHG92755.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_184_5
unknown

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comp(5131..5388)
DNA (258bp) protein (86aa)

This feature has no annotations

13_2_20cm_scaffold_184_6
unknown

Not on your lists

5517..5888
DNA (372bp) protein (124aa)

This feature has no annotations

13_2_20cm_scaffold_184_7
unknown

Not on your lists

6091..6531
DNA (441bp) protein (147aa)

This feature has no annotations

13_2_20cm_scaffold_184_8
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6542..7150)
DNA (609bp) protein (203aa)
methionine sulfoxide reductase A (EC:1.8.4.11)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_014
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SFM1_THIDA
13_2_20cm_scaffold_184_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

7340..9595
DNA (2256bp) protein (752aa)
TPR repeat-containing serine/threonin protein kinase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
protein kinase
Serine/threonine protein kinase id=8267299 bin=CD_OP8_4m species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
13_2_20cm_scaffold_184_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(9656..9979)
DNA (324bp) protein (108aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_2_20cm_scaffold_184_11
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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10134..12251
DNA (2118bp) protein (706aa)
Putative uncharacterized protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XSI0_PEDHD rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU03525.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter hepari
13_2_20cm_scaffold_184_12
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

12256..13473
DNA (1218bp) protein (406aa)
Lipolytic protein G-D-S-L family n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SL30_RHOMR rbh
G-D-S-L family lipolytic protein
Lipolytic protein G-D-S-L family {ECO:0000313|EMBL:AEN74547.1}; Flags: Precursor;; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.
13_2_20cm_scaffold_184_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

13488..14300
DNA (813bp) protein (271aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AZW7_RUBXD
D-mannonate oxidoreductase
D-mannonate oxidoreductase {ECO:0000313|EMBL:AHG92973.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_184_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

14341..15567
DNA (1227bp) protein (409aa)
Putative hexuronate transporter protein n=1 Tax=Xanthomonas albilineans (strain GPE PC73 / CFBP 7063) RepID=D2U8E9_XANAP
major facilitator superfamily MFS_1
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AHG87912.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_184_15
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15619..16863
DNA (1245bp) protein (415aa)
Mandelate racemase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XZF1_SORCE
mandelate racemase
Mandelate racemase {ECO:0000313|EMBL:AGP38602.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellul
13_2_20cm_scaffold_184_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

16875..19049
DNA (2175bp) protein (725aa)
Xylan alpha-1,2-glucuronidase {ECO:0000256|RuleBase:RU361198}; EC=3.2.1.131 {ECO:0000256|RuleBase:RU361198};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS
Alpha-glucuronidase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SG54_RHOMR rbh
Glycosyl hydrolase 67 middle domain protein
13_2_20cm_scaffold_184_17
unknown

Not on your lists

19097..19552
DNA (456bp) protein (152aa)

This feature has no annotations

13_2_20cm_scaffold_184_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

19651..22833
DNA (3183bp) protein (1061aa)
TonB-dependent receptor plug n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GP61_9BACT
TonB-dependent outer membrane protein, SusC/RagA
TonB-dependent outer membrane protein, SusC/RagA {ECO:0000313|EMBL:AHG93133.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_184_19
Rhodonellum psychrophilum, Rhodonellum, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

22863..24815
DNA (1953bp) protein (651aa)
Uncharacterized protein n=1 Tax=Rhodonellum psychrophilum GCM71 = DSM 17998 RepID=U5BR31_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ERM80338.1}; TaxID=1123057 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Rhodonellum.;" source="Rhodonellum psychrophilum GCM71 =
RagB/SusD domain-containing protein
13_2_20cm_scaffold_184_20
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

25043..25921
DNA (879bp) protein (293aa)
Beta-xylanase {ECO:0000256|RuleBase:RU361174}; EC=3.2.1.8 {ECO:0000256|RuleBase:RU361174};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomon
endo-1,4-beta-xylanase (EC:3.2.1.8)
Endo-1,4-beta-xylanase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024A6_SOLUE
13_2_20cm_scaffold_184_21
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

25954..26667
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=Nonomuraea coxensis RepID=UPI000380EC81
GntR domain protein
GntR domain protein {ECO:0000313|EMBL:AHG92979.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_184_22
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(26669..27058)
DNA (390bp) protein (130aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG88090.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_184_23
Streptomyces coelicolor, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27186..27722)
DNA (537bp) protein (179aa)
hypothetical protein n=1 Tax=Pleurocapsa sp. PCC 7319 RepID=UPI00034A8209
SC7A8.28; TetR family transcriptional regulator
Putative tetR-family transcriptional regulator {ECO:0000313|EMBL:CAB69777.1}; TaxID=100226 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflav
13_2_20cm_scaffold_184_24
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

27968..30034
DNA (2067bp) protein (689aa)
putative hybrid sensor histidine kinase (EC:2.7.13.3) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
histidine kinase
Putative Hybrid sensor histidine kinase id=4058804 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_2_20cm_scaffold_184_25
Desulfovibrio sp. X2, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30042..30419
DNA (378bp) protein (126aa)
Response regulator receiver protein n=1 Tax=Desulfovibrio sp. X2 RepID=S7U519_9DELT
Response regulator receiver protein {ECO:0000313|EMBL:EPR44372.1}; TaxID=941449 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source
response regulator receiver domain-containing protein
13_2_20cm_scaffold_184_26
Bacillus simplex, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

30456..30959
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416 / KR-200) RepID=L0A4C4_DEIPD
Uncharacterized protein {ECO:0000313|EMBL:CEG32653.1}; TaxID=1478 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus simplex.;"
hypothetical protein
13_2_20cm_scaffold_184_27
Desulfococcus multivorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30949..31974)
DNA (1026bp) protein (342aa)
Peptide methionine sulfoxide reductase msrB n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7U0L2_DESML
Peptide methionine sulfoxide reductase msrB {ECO:0000313|EMBL:EPR42857.1}; Flags: Precursor;; TaxID=1121405 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteracea
methionine-R-sulfoxide reductase
13_2_20cm_scaffold_184_28

Not on your lists

32094..32660
DNA (567bp) protein (189aa)
Marine sediment metagenome DNA, contig: S06H3_S16432 {ECO:0000313|EMBL:GAI33138.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
Putative uncharacterized protein id=4763845 bin=GWA2_Planctomycetia_40_7 species=Aeromonas hydrophila genus=Aeromonas taxon_order=Aeromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Planctomycetia_40_7 organism_group=Planctomycetes
13_2_20cm_scaffold_184_29
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(33186..36128)
DNA (2943bp) protein (981aa)
pcrA; ATP-dependent DNA helicase PcrA (EC:3.6.1.-); K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12] Tax=GWC2_Gemmatimonadetes_71_10_curated
ATP-dependent DNA helicase PcrA (EC:3.6.4.12)
DNA polymerase III, epsilon subunit n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XUL9_9BACT
13_2_20cm_scaffold_184_30
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

36213..37988
DNA (1776bp) protein (592aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A719_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG88939.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying 30 items

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