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13_2_20cm_scaffold_2000

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_2000_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

2..442
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A953_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_2_20cm_scaffold_2000_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

435..1232
DNA (798bp) protein (266aa)
trpA; tryptophan synthase alpha chain (EC:4.2.1.20); K01695 tryptophan synthase alpha chain [EC:4.2.1.20] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
trpA; tryptophan synthase alpha chain (EC:4.2.1.20)
Tryptophan synthase alpha chain n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A952_GEMAT
13_2_20cm_scaffold_2000_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

1229..3307
DNA (2079bp) protein (693aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2C4P2_9BACT
methyl-accepting chemotaxis sensory transducer Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
methyl-accepting chemotaxis protein
13_2_20cm_scaffold_2000_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

3367..3753
DNA (387bp) protein (129aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC:2.7.6.3); K00950 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] Tax=RIFCSPLOWO2_12_FULL_Gemmatim
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase n=1 Tax=Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 / 506) RepID=E4U4X5_OCEP5
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
13_2_20cm_scaffold_2000_5
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

3746..4561
DNA (816bp) protein (272aa)
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11); K00606 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] Tax=GWC2_Gemmatimonadetes_71_10_curated
3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Desulfurispirillum indicum (strain ATCC BAA-1389 / S5) RepID=E6W3R1_DESIS
13_2_20cm_scaffold_2000_6

Not on your lists

4558..5823
DNA (1266bp) protein (422aa)
Uncharacterized protein n=1 Tax=Oscillatoria acuminata PCC 6304 RepID=K9TR78_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:KKM82931.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
13_2_20cm_scaffold_2000_7
unknown

Not on your lists

5835..7517
DNA (1683bp) protein (561aa)

This feature has no annotations

13_2_20cm_scaffold_2000_8
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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7771..8541
DNA (771bp) protein (257aa)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00247609}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAA
pantothenate synthetase (EC:6.3.2.1)
Pantothenate synthetase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6QCX8_9FIRM
13_2_20cm_scaffold_2000_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

8706..9203
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A951_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_2_20cm_scaffold_2000_10
GWC2_Elusimicrobia_65_9_curated, Elusimicrobia, Bacteria

Not on your lists

9212..9583
DNA (372bp) protein (124aa)
hypothetical protein id=3526118 bin=GWA2_Elusimicrobia_66_18 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
hypothetical protein Tax=GWC2_Elusimicrobia_65_9_curated
13_2_20cm_scaffold_2000_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(9521..10528)
DNA (1008bp) protein (336aa)
hypothetical protein; K06941 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Probable dual-specificity RNA methyltransferase RlmN n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RLMN_GEMAT
hypothetical protein
13_2_20cm_scaffold_2000_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(10525..11421)
DNA (897bp) protein (299aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_2_20cm_scaffold_2000_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

11566..11931
DNA (366bp) protein (122aa)
ptsN; phosphotransferase system enzyme IIA, regulates nitrogen metabolism; K02806 PTS system, nitrogen regulatory IIA component [EC:2.7.1.69] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PTS system transporter subunit IIA; K02768 PTS system, fructose-specific IIA component [EC:2.7.1.69] id=24657712 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
PTS system transporter subunit IIA
13_2_20cm_scaffold_2000_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists


11937..13706
DNA (1770bp) protein (590aa)
Aspartate--tRNA ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A947_GEMAT rbh
Aspartyl-tRNA synthetase
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:AHG90893.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_2000_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

13703..14659
DNA (957bp) protein (319aa)
PhoH-like protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A946_GEMAT
PhoH family protein
PhoH family protein {ECO:0000313|EMBL:AHG90892.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_2000_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

14661..16841
DNA (2181bp) protein (727aa)
7TM receptor with intracellular metal dependent phosphohydrolase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SKE6_RHOMR
metal dependent phosphohydrolase
Metal dependent phosphohydrolase {ECO:0000313|EMBL:AHG90891.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_2000_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

16795..17259
DNA (465bp) protein (155aa)
Endoribonuclease YbeY n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A945_GEMAT
hypothetical protein; K07042 probable rRNA maturation factor Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_2_20cm_scaffold_2000_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

17259..18434
DNA (1176bp) protein (392aa)
Transporter n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A944_GEMAT
transporter Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
transporter-associated region
13_2_20cm_scaffold_2000_19
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

18431..19630
DNA (1200bp) protein (400aa)
CBS domain containing protein n=1 Tax=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) RepID=A4XAD3_SALTO
hypothetical protein Tax=RBG_16_RIF_CHLX_70_13_curated
CBS domain-containing protein
13_2_20cm_scaffold_2000_20
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19627..20973
DNA (1347bp) protein (449aa)
magnesium transporter n=1 Tax=Pedobacter agri RepID=UPI000299E7E1 rbh
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter
magnesium transporter
13_2_20cm_scaffold_2000_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

20995..22044
DNA (1050bp) protein (350aa)
putative transport system kinase; K07588 LAO/AO transport system kinase [EC:2.7.-.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative transport system kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A942_GEMAT
LAO/AO transport system ATPase
13_2_20cm_scaffold_2000_22
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

22041..22877
DNA (837bp) protein (279aa)
methylmalonyl-CoA mutase large subunit (EC:5.4.99.2); K01848 methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Methylmalonyl-CoA mutase family protein n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6Q3J6_9FIRM
methylmalonyl-CoA mutase, large subunit
Displaying 22 items

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