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13_2_20cm_scaffold_2819

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_2819_1

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comp(3..347)
DNA (345bp) protein (115aa)
Transcriptional regulator, GntR family n=2 Tax=Paenibacillus polymyxa RepID=E3ECJ3_PAEPS
Uncharacterized protein {ECO:0000313|EMBL:KKN68121.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
GntR family transcriptional regulator
13_2_20cm_scaffold_2819_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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561..779
DNA (219bp) protein (73aa)
long-chain fatty-acid-CoA ligase (EC:6.2.1.3); K00666 fatty-acyl-CoA synthase [EC:6.2.1.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
long-chain fatty-acid-CoA ligase (EC:6.2.1.3)
Long-chain fatty-acid-CoA ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A635_GEMAT
13_2_20cm_scaffold_2819_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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776..2608
DNA (1833bp) protein (611aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A636_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_2_20cm_scaffold_2819_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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2605..3138
DNA (534bp) protein (178aa)
mgh; 3-methyladenine DNA glycosylase (EC:3.2.2.-); K03652 DNA-3-methyladenine glycosylase [EC:3.2.2.21] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Putative 3-methyladenine DNA glycosylase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A637_GEMAT
3-methyladenine DNA glycosylase
13_2_20cm_scaffold_2819_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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3123..4184
DNA (1062bp) protein (354aa)
Zn-dependent dipeptidase, microsomal dipeptidase {ECO:0000313|EMBL:CDM65778.1}; EC=3.4.13.19 {ECO:0000313|EMBL:CDM65778.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4;
membrane dipeptidase n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B6F708
M19 family peptidase
13_2_20cm_scaffold_2819_6
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(4168..5412)
DNA (1245bp) protein (415aa)
hypothetical protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
13_2_20cm_scaffold_2819_7
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(5572..6765)
DNA (1194bp) protein (398aa)
kbl; putative 2-amino-3-ketobutyrate coenzyme A ligase (EC:2.3.1.29); K00639 glycine C-acetyltransferase [EC:2.3.1.29] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
kbl; putative 2-amino-3-ketobutyrate coenzyme A ligase (EC:2.3.1.29)
Putative 2-amino-3-ketobutyrate coenzyme A ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A638_GEMAT
13_2_20cm_scaffold_2819_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(6762..7790)
DNA (1029bp) protein (343aa)
threonine 3-dehydrogenase (EC:1.1.1.103); K00060 threonine 3-dehydrogenase [EC:1.1.1.103] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Threonine 3-dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A639_GEMAT
Alcohol dehydrogenase GroES domain protein
13_2_20cm_scaffold_2819_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(7849..8640)
DNA (792bp) protein (264aa)
putative oxidoreductase; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Short-chain dehydrogenase/reductase id=1773283 bin=GWD2_Deltaproteobacteria_55_8 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
short-chain dehydrogenase/reductase SDR
13_2_20cm_scaffold_2819_10
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(8754..10559)
DNA (1806bp) protein (602aa)
formate dehydrogenase subunit alpha; K00123 formate dehydrogenase, alpha subunit [EC:1.2.1.2] Tax=GWC2_Gemmatimonadetes_71_10_curated
fdhA-3; formate dehydrogenase, alpha subunit (EC:1.2.1.2)
Formate dehydrogenase alpha subunit n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RG40_MOOTA
13_2_20cm_scaffold_2819_11
unknown

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10796..11824
DNA (1029bp) protein (343aa)

This feature has no annotations

13_2_20cm_scaffold_2819_12
unknown

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comp(11763..11927)
DNA (165bp) protein (55aa)

This feature has no annotations

13_2_20cm_scaffold_2819_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(12047..12904)
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A642_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_2_20cm_scaffold_2819_14
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(12898..13602)
DNA (705bp) protein (235aa)
cation transporter n=1 Tax=Calothrix sp. PCC 7103 RepID=UPI0002FE3B55
cation diffusion facilitator family transporter Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
cation diffusion facilitator family transporter
Displaying 14 items

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